fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G25490 DREB1B, CBF1, ATCBF1 DRE BINDING PROTEIN 1B, C-repeat/DRE binding factor 1 (.1)

>AT4G25490.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 358
StyI C|C[AT][AT]GG 353


Click here to view TAIR data

>AT4G25490.1 length:642
ATGAACTCAT TTTCAGCTTT TTCTGAAATG TTTGGCTCCG ATTACGAGCC 
50
TCAAGGCGGA GATTATTGTC CGACGTTGGC CACGAGTTGT CCGAAGAAAC 
100
CGGCGGGCCG TAAGAAGTTT CGTGAGACTC GTCACCCAAT TTACAGAGGA 
150
GTTCGTCAAA GAAACTCCGG TAAGTGGGTT TCTGAAGTGA GAGAGCCAAA 
200
CAAGAAAACC AGGATTTGGC TCGGGACTTT CCAAACCGCT GAGATGGCAG 
250
CTCGTGCTCA CGACGTCGCT GCATTAGCCC TCCGTGGCCG ATCAGCATGT 
300
CTCAACTTCG CTGACTCGGC TTGGCGGCTA CGAATCCCGG AGTCAACATG 
350
CGCCAAGGAT ATCCAAAAAG CGGCTGCTGA AGCGGCGTTG GCTTTTCAAG 
400
ATGAGACGTG TGATACGACG ACCACGAATC ATGGCCTGGA CATGGAGGAG 
450
ACGATGGTGG AAGCTATTTA TACACCGGAA CAGAGCGAAG GTGCGTTTTA 
500
TATGGATGAG GAGACAATGT TTGGGATGCC GACTTTGTTG GATAATATGG 
550
CTGAAGGCAT GCTTTTACCG CCGCCGTCTG TTCAATGGAA TCATAATTAT 
600
GACGGCGAAG GAGATGGTGA CGTGTCGCTT TGGAGTTACT AA
650

>AT4G25490.1 longest ORF length:213
MNSFSAFSEM FGSDYEPQGG DYCPTLATSC PKKPAGRKKF RETRHPIYRG 
50
VRQRNSGKWV SEVREPNKKT RIWLGTFQTA EMAARAHDVA ALALRGRSAC 
100
LNFADSAWRL RIPESTCAKD IQKAAAEAAL AFQDETCDTT TTNHGLDMEE 
150
TMVEAIYTPE QSEGAFYMDE ETMFGMPTLL DNMAEGMLLP PPSVQWNHNY 
200
DGEGDGDVSL WSY
250