fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G25560 LAF1, ATMYB18 LONG AFTER FAR-RED LIGHT 1, myb domain protein 18 (.1)

>AT4G25560.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 823
PstI CTGCA|G 150
StyI C|C[AT][AT]GG 245, 553
XbaI T|CTAGA 474


Click here to view TAIR data

>AT4G25560.1 length:852
ATGGCGAAGA CGAAATATGG AGAGAGACAT AGGAAAGGGT TATGGTCACC 
50
TGAAGAAGAC GAGAAGCTAA GGAGCTTCAT CCTCTCTTAT GGCCATTCTT 
100
GCTGGACCAC TGTTCCCATC AAAGCTGGGT TACAAAGGAA TGGGAAGAGC 
150
TGCAGATTAA GATGGATTAA TTACCTAAGA CCAGGGTTAA AGAGGGATAT 
200
GATTAGTGCA GAAGAAGAAG AGACTATCTT GACGTTTCAT TCTTCCTTGG 
250
GTAACAAGTG GTCGCAAATA GCTAAATTCT TACCGGGAAG AACAGACAAT 
300
GAGATAAAGA ACTATTGGCA CTCTCATTTG AAAAAGAAAT GGCTCAAGTC 
350
TCAGAGCTTA CAAGATGCAA AATCTATTTC CCCTCCTTCG TCTTCATCAT 
400
CATCACTTGT TGCTTGTGGA AAAAGAAATC CGGAAACCTT GATCTCGAAT 
450
CACGTGTTCT CCTTCCAGAG ACTTCTAGAG AACAAATCTT CATCTCCCTC 
500
ACAAGAAAGC AACGGAAATA ACAGCCATCA ATGTTCTTCT GCTCCTGAGA 
550
TTCCAAGGCT TTTCTTCTCT GAATGGCTTT CTTCTTCATA TCCCCACACC 
600
GATTATTCCT CTGAGTTTAC CGACTCTAAG CACAGTCAAG CTCCAAATGT 
650
CGAAGAGACT CTCTCAGCTT ATGAAGAAAT GGGTGATGTT GATCAGTTCC 
700
ATTACAACGA AATGATGATC AACAACAGCA ACTGGACTCT TAACGACATT 
750
GTGTTTGGTT CCAAATGTAA GAAGCAGGAG CATCATATTT ATAGAGAGGC 
800
TTCAGATTGT AATTCTTCTG CTGAATTCTT TTCTCCATCA ACAACGACGT 
850
AA
900

>AT4G25560.1 longest ORF length:283
MAKTKYGERH RKGLWSPEED EKLRSFILSY GHSCWTTVPI KAGLQRNGKS 
50
CRLRWINYLR PGLKRDMISA EEEETILTFH SSLGNKWSQI AKFLPGRTDN 
100
EIKNYWHSHL KKKWLKSQSL QDAKSISPPS SSSSSLVACG KRNPETLISN 
150
HVFSFQRLLE NKSSSPSQES NGNNSHQCSS APEIPRLFFS EWLSSSYPHT 
200
DYSSEFTDSK HSQAPNVEET LSAYEEMGDV DQFHYNEMMI NNSNWTLNDI 
250
VFGSKCKKQE HHIYREASDC NSSAEFFSPS TTT
300