fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G26030 C2H2-like zinc finger protein (.1)

>AT4G26030.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 586
HpaI GTT|AAC 49, 196
NcoI C|CATGG 591
SpeI A|CTAGT 37
StyI C|C[AT][AT]GG 591


Click here to view TAIR data

>AT4G26030.1 length:663
ATGGTTTCTC CTTTCAGTAT GCCTTTCATA GCTCAAACTA GTGGTTTTGT 
50
TAACTATTCT CAAGTTTTTA TCACTCAAAC CATCGCAAAA AGGTATCATG 
100
CTCTTATTCC GACAAGCAAT ATGGTCATTG TCCAAAATGA TAATGATCGT 
150
GTCAACCGTT TCATGACTTC TTATCCACCA ATTTTGAAAT CTACAGTTAA 
200
CCCCCCAAAT GATTTTGATA AACAGTATGA AACCTTCACA CCTAAACCCA 
250
TCGATTTCTT TTGTTCGCAA CAAGACTATG CATGTCGTCA GCATTTGGAT 
300
ATATTTTCAT CCTCCCCAAA ACACTATCAT GAGCAATATG TTCATAAAAA 
350
TGGTCGGTCG GTGAAATATA TCTGTAAACC AACAGAGGTC CTTGAAGAAA 
400
TTCATGACGA AATCGATTAT GAAAAAGACG GTGGTTGGAT ATATAGCCTG 
450
CCGTTTGAGA AAGACAGTTC ATTTATATGT CTAAAGTGCA ATAGTTTGTT 
500
TGATACTTCA CAAATGTTGG TTGTACATAC AGAGTTAATT CATTCTAAGA 
550
ATGAGACTAA GAAAAGGCTT AAATTACATC ATCAAGAATT CCATGGTAAA 
600
TCTCATAAGA TCAACAAAGA TCAAACTGGA GGACAAAGTT GCAGAAGAAA 
650
GTTGAGGCAA TAG
700

>AT4G26030.1 longest ORF length:220
MVSPFSMPFI AQTSGFVNYS QVFITQTIAK RYHALIPTSN MVIVQNDNDR 
50
VNRFMTSYPP ILKSTVNPPN DFDKQYETFT PKPIDFFCSQ QDYACRQHLD 
100
IFSSSPKHYH EQYVHKNGRS VKYICKPTEV LEEIHDEIDY EKDGGWIYSL 
150
PFEKDSSFIC LKCNSLFDTS QMLVVHTELI HSKNETKKRL KLHHQEFHGK 
200
SHKINKDQTG GQSCRRKLRQ 
250