Locus |
Common name |
Short description |
AT4G26150 |
GATA22, CGA1, GNL |
GNC-LIKE, GATA TRANSCRIPTION FACTOR 22, cytokinin-responsive gata factor 1 (.1) |
>AT4G26150.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AvrII, BaeI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BlpI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PshAI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TfiI, TspRI, Tth111I, XbaI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AciI
| C|CGC |
705, 723, 729, 870 |
AflIII
| A|CPuPyGT |
839 |
AgeI
| A|CCGGT |
753 |
AluI
| AG|CT |
133, 973 |
AlwNI
| CAGNNN|CTG |
737 |
AseI
| AT|TAAT |
468 |
AvaI
| C|PyCGPuG |
277 |
AvaII
| G|G[AT]CC |
642, 651 |
BalI
| TGG|CCA |
713 |
BamHI
| G|GATCC |
73 |
BanI
| G|GPyPuCC |
330 |
BclI
| T|GATCA |
321, 854 |
BfaI
| C|TAG |
860, 947 |
BglI
| GCCNNNN|NGGC |
702 |
BglII
| A|GATCT |
27 |
BsaAI
| PyAC|GTPu |
840 |
BsaBI
| GATNN|NNATC |
380 |
BsaJI
| C|CNNGG |
716, 881 |
BsaWI
| [AT]|CCGG[AT] |
753 |
BsoBI
| C|PyCGPuG |
277 |
Bsp1286I
| G[GAT]GC[CAT]|C |
331 |
BspHI
| T|CATGA |
243, 758 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
330 |
BsrFI
| Pu|CCGGPy |
753 |
BssKI
| |CCNGG |
697 |
BstBI
| TT|CGAA |
456 |
BstNI
| CC|[AT]GG |
697 |
BstYI
| Pu|GATCPy |
27, 73 |
BtgI
| C|CPuPyGG |
716 |
Cac8I
| GCN|NGC |
702 |
Cfr10I
| [AG]|CCGG[TC] |
753 |
DdeI
| C|TNAG |
546 |
DpnI
| GA-CH3|TC |
26, 38, 72, 206, 320, 395, 853, 944 |
DpnII
| |GATC |
26, 38, 72, 206, 320, 395, 853, 944 |
EaeI
| Py|GGCCPu |
713 |
EcoO109I
| PuG|GNCCPy |
652 |
EcoRV
| GAT|ATC |
450, 789 |
Fnu4HI
| GC|NGC |
508, 705, 1011 |
HaeIII
| GG|CC |
694, 703, 712 |
HindIII
| A|AGCTT |
134 |
HinfI
| G|ANTC |
623 |
HpaII
| C|CGG |
752 |
Hpy188I
| TCN|GA |
297, 555, 603, 644, 924 |
HpyCH4III
| ACN|GT |
164, 956 |
HpyCH4IV
| A|CGT |
839 |
HpyCH4V
| TG|CA |
771 |
MboI
| |GATC |
26, 38, 72, 206, 320, 395, 853, 944 |
MscI
| TGG|CCA |
713 |
MseI
| T|TAA |
467 |
MspI
| C|CGG |
752 |
MwoI
| GCNNNNN|NNGC |
508, 702 |
NlaIII
| CATG| |
242, 421, 757 |
NlaIV
| GGN|NCC |
4, 73, 330, 652 |
PaeR7I
| C|TCGAG |
277 |
PmlI
| CAC|GTG |
840 |
PpuMI
| PuG|G[AT]CCPy |
652 |
PsiI
| TTA|TAA |
573, 804 |
PspGI
| |CC[AT]GG |
697 |
RsaI
| GT|AC |
223 |
Sau3AI
| |GATC |
26, 38, 72, 206, 320, 395, 853, 944 |
Sau96I
| G|GNCC |
642, 651, 703 |
ScrFI
| CC|NGG |
697 |
SfiI
| GGCCNNNN|NGGCC |
703 |
SmlI
| C|TPyPuAG |
277, 442, 995 |
Taqƒ¿I
| T|CGA |
276, 455, 939 |
TliI
| C|TCGAG |
277 |
TseI
| G|C[AT]GC |
508, 1011 |
Tsp45I
| |GT[CG]AC |
161 |
Tsp509I
| |AATT |
8, 354, 551 |
XcmI
| CCANNNNN|NNNNTGG |
1025 |
XhoI
| C|TCGAG |
277 |
Click here to view TAIR data
>AT4G26150.1 length:1059
ATGGGTTCCA ATTTTCATTA CACAATAGAT CTCAATGAAG ATCAAAACCA | 50 |
TCAGCCTTTT TTCGCTTCTC TTGGATCCTC TCTTCATCAT CATCTACAAC | 100 |
AACAACAACA ACAACAACAA CATTTTCATC ACCAAGCTTC TTCTAATCCC | 150 |
TCTTCTTTGA TGTCACCGTC TCTTTCCTAC TTTCCTTTCT TGATAAACTC | 200 |
TCGCCAAGAT CAAGTATATG TTGGGTACAA CAATAACACT TTTCATGATG | 250 |
TTCTTGATAC CCATATCTCC CAACCTCTCG AGACCAAGAA CTTTGTATCT | 300 |
GATGGTGGTT CATCATCAAG TGATCAAATG GTGCCCAAGA AGGAGACACG | 350 |
ACTAAAATTG ACGATAAAGA AGAAAGATAA TCATCAAGAC CAAACCGATC | 400 |
TTCCTCAATC CCCAATAAAA GACATGACAG GAACTAACTC GCTCAAGTGG | 450 |
ATATCTTCGA AGGTGAGATT AATGAAGAAG AAAAAGGCGA TTATTACCAC | 500 |
CAGCGACAGC AGCAAACAAC ACACTAATAA CGACCAATCC TCAAACCTAA | 550 |
GCAATTCGGA AAGACAGAAT GGTTATAACA ACGATTGCGT GATTAGGATT | 600 |
TGCTCCGATT GTAACACAAC CAAGACTCCT CTTTGGAGAA GTGGTCCGAG | 650 |
AGGTCCCAAG TCTCTTTGTA ACGCTTGTGG AATAAGGCAA AGGAAGGCCA | 700 |
GGCGGGCCGC TATGGCCACG GCAACCGCAA CCGCAGTCTC TGGCGTATCC | 750 |
CCACCGGTCA TGAAGAAGAA GATGCAAAAC AAGAACAAGA TATCAAATGG | 800 |
AGTTTATAAA ATCTTATCTC CTTTGCCCCT AAAGGTAAAC ACGTGTAAGA | 850 |
GAATGATCAC ACTAGAGGAG ACCGCATTAG CCGAGGATTT GGAGACCCAG | 900 |
AGCAACTCCA CGATGTTATC ATCTTCAGAC AATATCTATT TCGATGATCT | 950 |
AGCATTACTG TTGAGCAAAA GTTCAGCTTA TCAGCAAGTT TTCCCTCAAG | 1000 |
ATGAGAAGGA GGCTGCCATT TTACTAATGG CTCTATCGCA CGGAATGGTT | 1050 |
CACGGGTGA | 1100 |
>AT4G26150.1 longest ORF length:352
MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP | 50 |
SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS | 100 |
DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW | 150 |
ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI | 200 |
CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS | 250 |
PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ | 300 |
SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV | 350 |
HG | 400 |
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