fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G27310 B-box type zinc finger family protein (.1)

>AT4G27310.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 567
EcoRI G|AATTC 561


Click here to view TAIR data

>AT4G27310.1 length:672
ATGGGGAAGA AGTGTGATTT ATGTAACGGT GTTGCAAGAA TGTATTGCGA 
50
GTCAGATCAA GCTAGTTTAT GTTGGGATTG CGACGGTAAA GTTCACGGCG 
100
CTAATTTCTT GGTAGCTAAA CACACGCGTT GTCTTCTCTG TAGCGCTTGT 
150
CAGTCTCTTA CGCCGTGGAA AGCTACTGGG CTTCGTCTTG GCCCAACTTT 
200
CTCCGTCTGC GAGTCATGCG TCGCTCTTAA AAACGCCGGC GGTGGCCGTG 
250
GAAACAGAGT TTTATCGGAG AATCGTGGTC AGGAGGAGGT TAATAGTTTC 
300
GAGTCCGAAG AAGATCGGAT TAGAGAAGAT CACGGTGACG GTGACGACGC 
350
GGAGTCTTAC GATGATGATG AGGAAGAAGA TGAGGATGAA GAGTACAGCG 
400
ACGATGAGGA TGAGGATGAT GATGAGGATG GTGATGATGA GGAAGCGGAG 
450
AATCAAGTTG TGCCGTGGTC TGCGGCGGCG CAAGTTCCTC CGGTGATGAG 
500
TTCTTCATCT TCTGACGGAG GAAGCGGAGG TTCAGTGACG AAGAGGACGA 
550
GGGCTAGAGA GAATTCAGAT CTTCTCTGCT CCGATGATGA GATCGGAAGC 
600
TCTTCAGCTC AAGGGTCAAA CTATTCTCGG CCGTTGAAGC GATCGGCGTT 
650
TAAATCAACG GTTGTTGTTT AA
700

>AT4G27310.1 longest ORF length:223
MGKKCDLCNG VARMYCESDQ ASLCWDCDGK VHGANFLVAK HTRCLLCSAC 
50
QSLTPWKATG LRLGPTFSVC ESCVALKNAG GGRGNRVLSE NRGQEEVNSF 
100
ESEEDRIRED HGDGDDAESY DDDEEEDEDE EYSDDEDEDD DEDGDDEEAE 
150
NQVVPWSAAA QVPPVMSSSS SDGGSGGSVT KRTRARENSD LLCSDDEIGS 
200
SSAQGSNYSR PLKRSAFKST VVV
250