fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G27410 RD26, ANAC072 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1), NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.2), NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.3)

>AT4G27410.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 243
HindIII A|AGCTT 125
NcoI C|CATGG 36
NheI G|CTAGC 283, 315
StyI C|C[AT][AT]GG 36
XhoI C|TCGAG 414, 447


Click here to view TAIR data

>AT4G27410.1 length:495
ATGCACGAGT ATCGCTTAAT AGAACATTCT CGTAGCCATG GAAGCTCCAA 
50
GTTGGATGAT TGGGTGTTGT GTCGAATTTA CAAGAAAACA TCTGGATCTC 
100
AGAGACAAGC TGTTACTCCT GTTCAAGCTT GTCGTGAAGA GCATAGCACG 
150
AATGGGTCGT CATCGTCTTC TTCATCACAG CTTGACGACG TTCTTGATTC 
200
GTTCCCGGAG ATAAAAGACC AGTCTTTTAA TCTTCCTCGG ATGAATTCGC 
250
TCAGGACGAT TCTTAACGGG AACTTTGATT GGGCTAGCTT GGCAGGTCTT 
300
AATCCAATTC CAGAGCTAGC TCCGACCAAT GGATTACCGA GTTACGGTGG 
350
TTACGATGCG TTTCGAGCGG CGGAAGGTGA GGCGGAGAGT GGGCATGTGA 
400
ATCGGCAGCA GAACTCGAGC GGGTTGACTC AGAGTTTCGG GTACAGCTCG 
450
AGTGGGTTTG GTGTTTCGGG TCAAACATTC GAGTTTAGGC AATGA
500

>AT4G27410.1 longest ORF length:164
MHEYRLIEHS RSHGSSKLDD WVLCRIYKKT SGSQRQAVTP VQACREEHST 
50
NGSSSSSSSQ LDDVLDSFPE IKDQSFNLPR MNSLRTILNG NFDWASLAGL 
100
NPIPELAPTN GLPSYGGYDA FRAAEGEAES GHVNRQQNSS GLTQSFGYSS 
150
SGFGVSGQTF EFRQ
200