fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G27410 RD26, ANAC072 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1), NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.2), NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.3)

>AT4G27410.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 693
HindIII A|AGCTT 575
NcoI C|CATGG 486
NheI G|CTAGC 733, 765
StyI C|C[AT][AT]GG 166, 486
XhoI C|TCGAG 864, 897


Click here to view TAIR data

>AT4G27410.3 length:945
ATGGGTGTTA GAGAGAAAGA TCCGTTAGCC CAGTTGAGTT TGCCACCAGG 
50
TTTTAGATTT TATCCGACAG ATGAAGAGCT TCTTGTTCAG TATCTATGTC 
100
GGAAAGTTGC AGGCTATCAT TTCTCTCTCC AGGTCATCGG AGACATCGAT 
150
CTCTACAAGT TCGATCCTTG GGATTTGCCA AGTAAGCAAA CATGTTTCAC 
200
ATTTGTAGGG GAGTATAATT GTAACTATTT AGGTAAGGCT TTGTTTGGAG 
250
AGAAGGAATG GTATTTCTTT AGCCCAAGAG ATCGGAAATA TCCGAACGGG 
300
TCAAGACCCA ATAGAGTAGC CGGGTCGGGT TATTGGAAAG CAACGGGTAC 
350
TGACAAAATT ATCACGGCGG ATGGTCGTCG TGTCGGGATT AAAAAAGCTC 
400
TGGTCTTTTA CGCCGGAAAA GCTCCCAAAG GCACTAAAAC CAACTGGATT 
450
ATGCACGAGT ATCGCTTAAT AGAACATTCT CGTAGCCATG GAAGCTCCAA 
500
GTTGGATGAT TGGGTGTTGT GTCGAATTTA CAAGAAAACA TCTGGATCTC 
550
AGAGACAAGC TGTTACTCCT GTTCAAGCTT GTCGTGAAGA GCATAGCACG 
600
AATGGGTCGT CATCGTCTTC TTCATCACAG CTTGACGACG TTCTTGATTC 
650
GTTCCCGGAG ATAAAAGACC AGTCTTTTAA TCTTCCTCGG ATGAATTCGC 
700
TCAGGACGAT TCTTAACGGG AACTTTGATT GGGCTAGCTT GGCAGGTCTT 
750
AATCCAATTC CAGAGCTAGC TCCGACCAAT GGATTACCGA GTTACGGTGG 
800
TTACGATGCG TTTCGAGCGG CGGAAGGTGA GGCGGAGAGT GGGCATGTGA 
850
ATCGGCAGCA GAACTCGAGC GGGTTGACTC AGAGTTTCGG GTACAGCTCG 
900
AGTGGGTTTG GTGTTTCGGG TCAAACATTC GAGTTTAGGC AATGA
950

>AT4G27410.3 longest ORF length:314
MGVREKDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGYH FSLQVIGDID 
50
LYKFDPWDLP SKQTCFTFVG EYNCNYLGKA LFGEKEWYFF SPRDRKYPNG 
100
SRPNRVAGSG YWKATGTDKI ITADGRRVGI KKALVFYAGK APKGTKTNWI 
150
MHEYRLIEHS RSHGSSKLDD WVLCRIYKKT SGSQRQAVTP VQACREEHST 
200
NGSSSSSSSQ LDDVLDSFPE IKDQSFNLPR MNSLRTILNG NFDWASLAGL 
250
NPIPELAPTN GLPSYGGYDA FRAAEGEAES GHVNRQQNSS GLTQSFGYSS 
300
SGFGVSGQTF EFRQ
350