| Locus |
Common name |
Short description |
| AT4G27950 |
CRF4 |
cytokinin response factor 4 (.1) |
>AT4G27950.1 CDS map
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Uncut enzymes: Acc65I, AccIII(BspMII), AfeI, AflII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstZ17I, Bsu36I, BtrI, BtsI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, NaeI, , NarI, NciI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp509I, Tth111I, XbaI, XhoI, XmaI
| Name |
Recognition sequence |
Cut positions |
| AatII
| GACGT|C |
259 |
| AccI
| GT|[AC][TG]AC |
466 |
| AccII(FnuDII)
| CG|CG |
353 |
| AciI
| C|CGC |
352 |
| AclI
| AA|CGTT |
298 |
| AflIII
| A|CPuPyGT |
201, 575 |
| AgeI
| A|CCGGT |
540, 690 |
| AluI
| AG|CT |
242, 454, 731 |
| AvaII
| G|G[AT]CC |
281 |
| BfaI
| C|TAG |
237 |
| BsaHI
| GPu|CGPyC |
151, 259 |
| BsaJI
| C|CNNGG |
354, 373 |
| BsaWI
| [AT]|CCGG[AT] |
284, 540, 564, 690 |
| BsiHKAI
| G[AT]GC[AT]|C |
46 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
46 |
| BspDI
| AT|CGAT |
673 |
| BsrFI
| Pu|CCGGPy |
253, 540, 690 |
| BssKI
| |CCNGG |
118 |
| BstF5I
| GGATGNN| |
10 |
| BstNI
| CC|[AT]GG |
118 |
| BstUI
| CG|CG |
353 |
| BstXI
| CCANNNNN|NTGG |
733 |
| BstYI
| Pu|GATCPy |
21 |
| BtgI
| C|CPuPyGG |
354, 373 |
| Cac8I
| GCN|NGC |
734 |
| Cfr10I
| [AG]|CCGG[TC] |
253, 540, 690 |
| ClaI
| AT|CGAT |
673 |
| DdeI
| C|TNAG |
24, 406 |
| DpnI
| GA-CH3|TC |
20, 143, 223, 401, 842, 937, 965, 989 |
| DpnII
| |GATC |
20, 143, 223, 401, 842, 937, 965, 989 |
| EaeI
| Py|GGCCPu |
116, 333 |
| EcoRV
| GAT|ATC |
588, 984 |
| Fnu4HI
| GC|NGC |
241, 355, 387, 456, 477 |
| HaeIII
| GG|CC |
115, 332, 494 |
| HinfI
| G|ANTC |
111, 159, 229, 292, 303, 395, 421, 594, 606, 771, 816, 975 |
| HpaII
| C|CGG |
252, 283, 330, 415, 539, 563, 689 |
| Hpy188I
| TCN|GA |
61, 226, 272, 591, 626, 660, 933, 987 |
| Hpy99I
| CG[AT]CG| |
170, 257, 274 |
| HpyCH4III
| ACN|GT |
54, 309, 519 |
| HpyCH4IV
| A|CGT |
199, 258, 297 |
| HpyCH4V
| TG|CA |
439 |
| MboI
| |GATC |
20, 143, 223, 401, 842, 937, 965, 989 |
| MseI
| T|TAA |
216, 693 |
| MspA1I
| C[AC]G|C[GT]G |
354 |
| MspI
| C|CGG |
252, 283, 330, 415, 539, 563, 689 |
| MwoI
| GCNNNNN|NNGC |
453 |
| N.BstNBI
| GAGTCNNNN|N |
234 |
| NcoI
| C|CATGG |
373 |
| NdeI
| CA|TATG |
653 |
| NlaIII
| CATG| |
372, 574 |
| NlaIV
| GGN|NCC |
666 |
| NspI
| PuCATG|Py |
575 |
| PciI
| A|CATGT |
575 |
| PspGI
| |CC[AT]GG |
118 |
| RsaI
| GT|AC |
37, 67, 349, 432, 521, 542 |
| SacII
| CCGC|GG |
354 |
| Sau3AI
| |GATC |
20, 143, 223, 401, 842, 937, 965, 989 |
| Sau96I
| G|GNCC |
281, 495 |
| ScrFI
| CC|NGG |
118 |
| SgrAI
| CPu|CCGGPyG |
254 |
| StyI
| C|C[AT][AT]GG |
373 |
| Taqƒ¿I
| T|CGA |
193, 231, 584, 672, 798, 840, 903 |
| TfiI
| G|A[AT]TC |
159, 292, 303, 395, 421, 594, 606, 771, 816, 975 |
| TseI
| G|C[AT]GC |
241, 456, 477 |
| Tsp45I
| |GT[CG]AC |
109, 148 |
| TspRI
| NNCA[CG]TGNN| |
33, 103, 157 |
| XcmI
| CCANNNNN|NNNNTGG |
382 |
| XmnI
| GAANN|NNTTC |
182, 880 |
Click here to view TAIR data
>AT4G27950.1 length:1008
ATGATGATGG ATGAGTTTAT GGATCTTAGA CCAGTGAAGT ACACAGAGCA | 50 |
CAAGACTGTT ATCAGAAAGT ACACTAAAAA GTCGTCTATG GAGAGGAAGA | 100 |
CCAGTGTTCG TGACTCGGCC AGGTTGGTTC GGGTCTCAAT GACGGATCGT | 150 |
GACGCCACTG ATTCATCAAG CGACGAGGAA GAGTTTCTGT TCCCTCGAAG | 200 |
ACGTGTCAAG AGATTGATTA ACGAGATCAG AGTCGAGCCT AGCAGCTCTT | 250 |
CCACCGGCGA CGTCTCTGCT TCTCCGACGA AGGACCGGAA AAGAATCAAC | 300 |
GTTGATTCTA CGGTTCAAAA GCCCTCTGTT TCCGGCCAAA ACCAGAAGAA | 350 |
GTACCGCGGC GTGAGACAGC GACCATGGGG AAAATGGGCG GCGGAGATTC | 400 |
GTGATCCTGA GCAACGCCGG AGAATCTGGC TCGGTACTTT TGCAACGGCG | 450 |
GAGGAAGCTG CCATCGTCTA CGACAACGCA GCAATCAAAC TTCGTGGCCC | 500 |
TGATGCTCTT ACCAACTTCA CCGTACAACC AGAACCAGAA CCGGTACAAG | 550 |
AACAAGAACA AGAACCGGAG AGCAACATGT CGGTTTCGAT ATCAGAATCA | 600 |
ATGGACGATT CTCAACATCT ATCATCTCCG ACATCGGTTC TCAACTACCA | 650 |
AACATATGTC TCGGAGGAAC CAATCGATAG TCTTATCAAA CCGGTTAAAC | 700 |
AAGAGTTTCT TGAACCAGAA CAAGAGCCAA TAAGCTGGCA TCTTGGAGAA | 750 |
GGTAATACTA ATACTAATGA TGATTCATTT CCATTGGACA TTACATTTCT | 800 |
CGACAACTAT TTCAATGAAT CATTACCAGA CATCTCCATC TTCGATCAAC | 850 |
CTATGTCTCC TATTCAACCA ACAGAGAATG ATTTCTTCAA CGACCTTATG | 900 |
TTATTCGATA GCAACGCAGA AGAATACTAC TCCTCCGAGA TCAAAGAGAT | 950 |
TGGTTCATCG TTCAACGATC TTGATGATTC TTTGATATCC GATCTCTTAC | 1000 |
TTGTGTGA | 1050 |
>AT4G27950.1 longest ORF length:335
MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR | 50 |
DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN | 100 |
VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA | 150 |
EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES | 200 |
MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE | 250 |
GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM | 300 |
LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV | 350 |
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