fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G27950 CRF4 cytokinin response factor 4 (.1)

>AT4G27950.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 588, 984
NcoI C|CATGG 373
NdeI CA|TATG 653
StyI C|C[AT][AT]GG 373


Click here to view TAIR data

>AT4G27950.1 length:1008
ATGATGATGG ATGAGTTTAT GGATCTTAGA CCAGTGAAGT ACACAGAGCA 
50
CAAGACTGTT ATCAGAAAGT ACACTAAAAA GTCGTCTATG GAGAGGAAGA 
100
CCAGTGTTCG TGACTCGGCC AGGTTGGTTC GGGTCTCAAT GACGGATCGT 
150
GACGCCACTG ATTCATCAAG CGACGAGGAA GAGTTTCTGT TCCCTCGAAG 
200
ACGTGTCAAG AGATTGATTA ACGAGATCAG AGTCGAGCCT AGCAGCTCTT 
250
CCACCGGCGA CGTCTCTGCT TCTCCGACGA AGGACCGGAA AAGAATCAAC 
300
GTTGATTCTA CGGTTCAAAA GCCCTCTGTT TCCGGCCAAA ACCAGAAGAA 
350
GTACCGCGGC GTGAGACAGC GACCATGGGG AAAATGGGCG GCGGAGATTC 
400
GTGATCCTGA GCAACGCCGG AGAATCTGGC TCGGTACTTT TGCAACGGCG 
450
GAGGAAGCTG CCATCGTCTA CGACAACGCA GCAATCAAAC TTCGTGGCCC 
500
TGATGCTCTT ACCAACTTCA CCGTACAACC AGAACCAGAA CCGGTACAAG 
550
AACAAGAACA AGAACCGGAG AGCAACATGT CGGTTTCGAT ATCAGAATCA 
600
ATGGACGATT CTCAACATCT ATCATCTCCG ACATCGGTTC TCAACTACCA 
650
AACATATGTC TCGGAGGAAC CAATCGATAG TCTTATCAAA CCGGTTAAAC 
700
AAGAGTTTCT TGAACCAGAA CAAGAGCCAA TAAGCTGGCA TCTTGGAGAA 
750
GGTAATACTA ATACTAATGA TGATTCATTT CCATTGGACA TTACATTTCT 
800
CGACAACTAT TTCAATGAAT CATTACCAGA CATCTCCATC TTCGATCAAC 
850
CTATGTCTCC TATTCAACCA ACAGAGAATG ATTTCTTCAA CGACCTTATG 
900
TTATTCGATA GCAACGCAGA AGAATACTAC TCCTCCGAGA TCAAAGAGAT 
950
TGGTTCATCG TTCAACGATC TTGATGATTC TTTGATATCC GATCTCTTAC 
1000
TTGTGTGA
1050

>AT4G27950.1 longest ORF length:335
MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR 
50
DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN 
100
VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA 
150
EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES 
200
MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE 
250
GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM 
300
LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
350