Locus |
Common name |
Short description |
AT4G28500 |
ANAC073, SND2, NST7 |
SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 2, NAC domain containing protein 73 (.1) |
>AT4G28500.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
155 |
HindIII
| A|AGCTT |
256 |
PstI
| CTGCA|G |
692 |
SacI
| GAGCT|C |
628 |
SmaI
| CCC|GGG |
57 |
Click here to view TAIR data
>AT4G28500.1 length:918
ATGACTTGGT GCAATGACCG TAGCGATGTT CAGACCGTTG AAAGAATCAT | 50 |
TCCCTCCCCG GGGGCGGCTG AGTCCCCCGT AGCCTCACTT CCGGTCTCTT | 100 |
GTCACAAAAC TTGCCCTTCT TGTGGCCATA ACTTCAAGTT TCACGAACAG | 150 |
GCTGGGATCC ATGACTTGCC GGGACTTCCT GCTGGAGTAA AATTTGATCC | 200 |
GACGGATCAA GAGGTCTTGG AGCATCTTGA AGGCAAGGTA AGAGATGACG | 250 |
CAAAAAAGCT TCATCCTCTC ATTGATGAGT TTATCCGTAC CATCGATGGT | 300 |
GAAAACGGCA TTTGTTATAC CCATCCTGAA AAATTGCCAG GAGTGAACAA | 350 |
GGACGGGACG GTGCGTCATT TCTTCCACCG ACCGTCGAAG GCATACACGA | 400 |
CGGGAACAAG AAAGCGACGT AAAGTCCACA CTGATTCTGA CGTCGGTGGA | 450 |
GAGACACGGT GGCACAAGAC AGGAAAAACA CGGCCAGTTC TTGCTGGAGG | 500 |
AAGAGTGAGA GGCTACAAGA AAATCCTAGT GCTCTACACA AACTACGGCA | 550 |
AACAAAAAAA ACCCGAGAAG ACTAATTGGG TAATGCATCA ATATCATCTT | 600 |
GGCACTAGCG AGGAAGAGAA AGAAGGTGAG CTCGTCGTCT CCAAAGTCTT | 650 |
TTACCAGACT CAACCACGTC AATGCGGTGG CTCCGTTGCT GCTGCAGCCA | 700 |
CCGCTAAGGA CCGACCTTAC CTCCACGGCC TCGGTGGAGG TGGTGGCCGC | 750 |
CACCTTCATT ACCATCTTCA TCATAACAAC GGTAACGGTA AGAGCAACGG | 800 |
CAGTGGGGGA ACCGCCGGAG CCGGTGAGTA TTATCACAAT ATTCCGGCTA | 850 |
TTATCTCGTT CAATCAGACC GGGATACAGA ACCACTTGGT TCATGACTCT | 900 |
CAACCTTTTA TCCCTTAA | 950 |
>AT4G28500.1 longest ORF length:305
MTWCNDRSDV QTVERIIPSP GAAESPVASL PVSCHKTCPS CGHNFKFHEQ | 50 |
AGIHDLPGLP AGVKFDPTDQ EVLEHLEGKV RDDAKKLHPL IDEFIRTIDG | 100 |
ENGICYTHPE KLPGVNKDGT VRHFFHRPSK AYTTGTRKRR KVHTDSDVGG | 150 |
ETRWHKTGKT RPVLAGGRVR GYKKILVLYT NYGKQKKPEK TNWVMHQYHL | 200 |
GTSEEEKEGE LVVSKVFYQT QPRQCGGSVA AAATAKDRPY LHGLGGGGGR | 250 |
HLHYHLHHNN GNGKSNGSGG TAGAGEYYHN IPAIISFNQT GIQNHLVHDS | 300 |
QPFIP | 350 |
|