fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G28500 ANAC073, SND2, NST7 SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 2, NAC domain containing protein 73 (.1)

>AT4G28500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 155
HindIII A|AGCTT 256
PstI CTGCA|G 692
SacI GAGCT|C 628
SmaI CCC|GGG 57


Click here to view TAIR data

>AT4G28500.1 length:918
ATGACTTGGT GCAATGACCG TAGCGATGTT CAGACCGTTG AAAGAATCAT 
50
TCCCTCCCCG GGGGCGGCTG AGTCCCCCGT AGCCTCACTT CCGGTCTCTT 
100
GTCACAAAAC TTGCCCTTCT TGTGGCCATA ACTTCAAGTT TCACGAACAG 
150
GCTGGGATCC ATGACTTGCC GGGACTTCCT GCTGGAGTAA AATTTGATCC 
200
GACGGATCAA GAGGTCTTGG AGCATCTTGA AGGCAAGGTA AGAGATGACG 
250
CAAAAAAGCT TCATCCTCTC ATTGATGAGT TTATCCGTAC CATCGATGGT 
300
GAAAACGGCA TTTGTTATAC CCATCCTGAA AAATTGCCAG GAGTGAACAA 
350
GGACGGGACG GTGCGTCATT TCTTCCACCG ACCGTCGAAG GCATACACGA 
400
CGGGAACAAG AAAGCGACGT AAAGTCCACA CTGATTCTGA CGTCGGTGGA 
450
GAGACACGGT GGCACAAGAC AGGAAAAACA CGGCCAGTTC TTGCTGGAGG 
500
AAGAGTGAGA GGCTACAAGA AAATCCTAGT GCTCTACACA AACTACGGCA 
550
AACAAAAAAA ACCCGAGAAG ACTAATTGGG TAATGCATCA ATATCATCTT 
600
GGCACTAGCG AGGAAGAGAA AGAAGGTGAG CTCGTCGTCT CCAAAGTCTT 
650
TTACCAGACT CAACCACGTC AATGCGGTGG CTCCGTTGCT GCTGCAGCCA 
700
CCGCTAAGGA CCGACCTTAC CTCCACGGCC TCGGTGGAGG TGGTGGCCGC 
750
CACCTTCATT ACCATCTTCA TCATAACAAC GGTAACGGTA AGAGCAACGG 
800
CAGTGGGGGA ACCGCCGGAG CCGGTGAGTA TTATCACAAT ATTCCGGCTA 
850
TTATCTCGTT CAATCAGACC GGGATACAGA ACCACTTGGT TCATGACTCT 
900
CAACCTTTTA TCCCTTAA
950

>AT4G28500.1 longest ORF length:305
MTWCNDRSDV QTVERIIPSP GAAESPVASL PVSCHKTCPS CGHNFKFHEQ 
50
AGIHDLPGLP AGVKFDPTDQ EVLEHLEGKV RDDAKKLHPL IDEFIRTIDG 
100
ENGICYTHPE KLPGVNKDGT VRHFFHRPSK AYTTGTRKRR KVHTDSDVGG 
150
ETRWHKTGKT RPVLAGGRVR GYKKILVLYT NYGKQKKPEK TNWVMHQYHL 
200
GTSEEEKEGE LVVSKVFYQT QPRQCGGSVA AAATAKDRPY LHGLGGGGGR 
250
HLHYHLHHNN GNGKSNGSGG TAGAGEYYHN IPAIISFNQT GIQNHLVHDS 
300
QPFIP
350