Locus |
Common name |
Short description |
AT4G28530 |
ANAC074 |
NAC domain containing protein 74 (.1.2) |
>AT4G28530.2 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, ClaI, DdeI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MspA1I, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TfiI, TliI, Tsp45I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
745 |
AccIII(BspMII)
| T|CCGGA |
483 |
AflIII
| A|CPuPyGT |
847 |
AluI
| AG|CT |
148, 207, 585 |
ApoI
| Pu|AATTPy |
732 |
AvaII
| G|G[AT]CC |
19, 607 |
BamHI
| G|GATCC |
351 |
BclI
| T|GATCA |
108, 573, 714, 777 |
BfaI
| C|TAG |
815 |
BsaAI
| PyAC|GTPu |
356 |
BsaBI
| GATNN|NNATC |
559, 676, 782, 861 |
BsaJI
| C|CNNGG |
34, 202 |
BsaWI
| [AT]|CCGG[AT] |
483 |
BspEI
| T|CCGGA |
483 |
BsrFI
| Pu|CCGGPy |
613 |
BsrI
| ACTGGN| |
280, 317, 377 |
BssKI
| |CCNGG |
33 |
BstF5I
| GGATGNN| |
868 |
BstYI
| Pu|GATCPy |
351, 486 |
BtgI
| C|CPuPyGG |
202 |
Cfr10I
| [AG]|CCGG[TC] |
613 |
DpnI
| GA-CH3|TC |
107, 167, 263, 335, 350, 485, 572, 676, 713, 776, 833, 855, 884 |
DpnII
| |GATC |
107, 167, 263, 335, 350, 485, 572, 676, 713, 776, 833, 855, 884 |
EaeI
| Py|GGCCPu |
615 |
EcoRV
| GAT|ATC |
284 |
Fnu4HI
| GC|NGC |
584, 596 |
HaeIII
| GG|CC |
97, 614, 707 |
HincII
| GTPy|PuAC |
745, 763 |
HindIII
| A|AGCTT |
149 |
HinfI
| G|ANTC |
411, 701, 720 |
HpaII
| C|CGG |
32, 482, 612 |
Hpy188I
| TCN|GA |
105, 452, 785, 864, 882 |
Hpy99I
| CG[AT]CG| |
743 |
HpyCH4III
| ACN|GT |
303, 342, 757 |
HpyCH4IV
| A|CGT |
355, 741 |
HpyCH4V
| TG|CA |
83, 186, 386 |
MboI
| |GATC |
107, 167, 263, 335, 350, 485, 572, 676, 713, 776, 833, 855, 884 |
MfeI
| C|AATTG |
367 |
MseI
| T|TAA |
227, 471, 489 |
MslI
| CAPyNN|NNPuTG |
53, 116, 194, 545 |
MspI
| C|CGG |
32, 482, 612 |
MwoI
| GCNNNNN|NNGC |
206, 515, 593, 734 |
N.BstNBI
| GAGTCNNNN|N |
706, 725 |
NciI
| CC|[CG]GG |
33 |
NcoI
| C|CATGG |
202 |
NlaIII
| CATG| |
110, 201, 545, 654, 704, 820, 846, 892 |
NlaIV
| GGN|NCC |
19, 351 |
NspI
| PuCATG|Py |
655, 847 |
PciI
| A|CATGT |
847 |
PflFI
| GACN|NNGTC |
379 |
PsiI
| TTA|TAA |
438 |
RsaI
| GT|AC |
244, 357 |
SalI
| G|TCGAC |
745 |
Sau3AI
| |GATC |
107, 167, 263, 335, 350, 485, 572, 676, 713, 776, 833, 855, 884 |
Sau96I
| G|GNCC |
19, 97, 607, 708 |
ScrFI
| CC|NGG |
33 |
StyI
| C|C[AT][AT]GG |
202 |
Taqƒ¿I
| T|CGA |
40, 265, 337, 698, 744 |
TseI
| G|C[AT]GC |
584, 596 |
Tsp509I
| |AATT |
24, 366, 431, 491, 731, 788 |
TspRI
| NNCA[CG]TGNN| |
578, 760, 772 |
Tth111I
| GACN|NNGTC |
379 |
Click here to view TAIR data
>AT4G28530.2 length:948
ATGGGTTTGA AAGATATTGG GTCCAAATTG CCACCGGGGT TTCGATTTCA | 50 |
TCCAAGTGAT GAAGAGTTGG TTTGTCATTA TCTTTGCAAC AAGATTAGGG | 100 |
CCAAATCTGA TCATGGTGAT GTTGATGATG ATGATGATGA TGTTGATGAA | 150 |
GCTTTGAAGG GTTCTACTGA TCTTGTGGAG ATTGACTTGC ATATCTGTGA | 200 |
GCCATGGGAG CTTCCTGATG TGGCAAAGTT AAACGCAAAG GAATGGTACT | 250 |
TCTTCAGTTT CCGTGATCGA AAGTATGCTA CTGGATATCG CACGAACAGA | 300 |
GCGACAGTAA GCGGATACTG GAAAGCAACA GGAAAAGATC GAACGGTGAT | 350 |
GGATCCACGT ACAAGGCAAT TGGAAGACTG GGTCTTGTGC AGAGTGTTCA | 400 |
ACAAAGGCAG AGACTCATCG CTACAAGACA ATAATTATTA TAACAATGAT | 450 |
AATCAGACGC AAAGGCTTGA AGTTAATGAC GCTCCGGATC TTAATTACAA | 500 |
CAATCAGTTG CCACCTTTGC TATCATCCCC TCCTCATAAT CATCAACATG | 550 |
AGAAGATGAA AATCCAAGTT TGTGATCAGT GGGAGCAGCT AATGAAGCAG | 600 |
CCTTCAAGGA CCACCGGCCA CCCCTATCAT CACCATTGTC ATCATCAAAC | 650 |
CATAGCATGT GGTTGGGAGC AGATGATGAT CGGTTCGCTG TCATCACCTT | 700 |
CGAGTCATGG CCCTGATCAC GAGTCCTTGC TAAATTTGCT TTACGTCGAC | 750 |
AATAACAACA GTGTCAACAT CAGTGGTGAT CATCATCAGA ATTATGAGAA | 800 |
GATTTTGTTG TCATCACTAG ACATGACGAG TTTGGATCAC GACAAGACAT | 850 |
GTATGGGATC ATCATCGGAT GGTGGTATGG TCTCTGATCT TCACATGGAA | 900 |
TGTGGTGGAT TGAGTTTTGA GACCGAAAAT ATCCTCGCTT TCCAATGA | 950 |
>AT4G28530.2 longest ORF length:315
MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE | 50 |
ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR | 100 |
ATVSGYWKAT GKDRTVMDPR TRQLEDWVLC RVFNKGRDSS LQDNNYYNND | 150 |
NQTQRLEVND APDLNYNNQL PPLLSSPPHN HQHEKMKIQV CDQWEQLMKQ | 200 |
PSRTTGHPYH HHCHHQTIAC GWEQMMIGSL SSPSSHGPDH ESLLNLLYVD | 250 |
NNNSVNISGD HHQNYEKILL SSLDMTSLDH DKTCMGSSSD GGMVSDLHME | 300 |
CGGLSFETEN ILAFQ | 350 |
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