Locus |
Common name |
Short description |
AT4G28640 |
IAA11 |
indole-3-acetic acid inducible 11 (.1.2.3) |
>AT4G28640.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NdeI, NotI, PacI, PstI, SacI, SalI, SmaI, XhoI
Name |
Recognition sequence |
Cut positions |
HpaI
| GTT|AAC |
310 |
NcoI
| C|CATGG |
242 |
NheI
| G|CTAGC |
205 |
PvuII
| CAG|CTG |
233 |
SpeI
| A|CTAGT |
253 |
StyI
| C|C[AT][AT]GG |
123, 242 |
XbaI
| T|CTAGA |
498 |
Click here to view TAIR data
>AT4G28640.1 length:741
ATGGAAGGCG GTTCCGCTAG TGGATCGGCT TCGGCTTTGT CAAACGATGA | 50 |
AAATCTCGTC GTTTCTTGTG AGGATTCTTC TTCTCCTATA GGGAATGAGC | 100 |
TTGAGCTTGG TCTTACGTTG AGCCTTGGTC GCAAAGGGTA TCGAGATTGT | 150 |
AGGGTTTACG CTGATGATTC TTCTTCTTCT TCATCATCTT CTTCTCTGAG | 200 |
CAGAGCTAGC GTAATTGCTG GGATCAAGAG GACAGCTGAT TCCATGGCTG | 250 |
CAACTAGTGG GCAAGTTGTG GGATGGCCAC CAATAAGGAC TTACAGAATG | 300 |
AACAGTATGG TTAACCAAGC TAAGGCTTCA GCCACTGAAG ATCCGAACTT | 350 |
GGAGATAAGT CAAGCCGTAA ACAAGAATAG AAGTGATTCA ACAAAGATGA | 400 |
GAAATTCCAT GTTTGTTAAG GTGACTATGG ATGGCATTCC TATTGGAAGG | 450 |
AAAATCGATC TGAATGCTCA TAAATGCTAT GAATCATTGT CAAACACTCT | 500 |
AGAGGAAATG TTTCTGAAAC CTAAATTAGG TTCACGCACA CTAGAAACCG | 550 |
ATGGTCACAT GGAAACACCG GTCAAGATAC TACCAGATGG GTCTTCCGGA | 600 |
TTAGTACTAA CGTATGAAGA CAAGGAAGGA GATTGGATGC TTGTTGGCGA | 650 |
TGTTCCGTGG GGGATGTTTA TTGGTTCAGT GAGAAGGCTC CGGATAATGA | 700 |
AAACATCGGA GGCTACTGGT AAAGCTCAGA TGATATTATG A | 750 |
>AT4G28640.1 longest ORF length:246
MEGGSASGSA SALSNDENLV VSCEDSSSPI GNELELGLTL SLGRKGYRDC | 50 |
RVYADDSSSS SSSSSLSRAS VIAGIKRTAD SMAATSGQVV GWPPIRTYRM | 100 |
NSMVNQAKAS ATEDPNLEIS QAVNKNRSDS TKMRNSMFVK VTMDGIPIGR | 150 |
KIDLNAHKCY ESLSNTLEEM FLKPKLGSRT LETDGHMETP VKILPDGSSG | 200 |
LVLTYEDKEG DWMLVGDVPW GMFIGSVRRL RIMKTSEATG KAQMIL | 250 |
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