fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G28815 bHLH127 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT4G28815.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
NcoI C|CATGG 632
NdeI CA|TATG 682
PstI CTGCA|G 452
SacI GAGCT|C 82
StyI C|C[AT][AT]GG 632
XbaI T|CTAGA 594
XhoI C|TCGAG 419


Click here to view TAIR data

>AT4G28815.1 length:924
ATGATGATTA TATCATCACA GATTCTTCTT CTTTTTGGTT TTAAACTTTT 
50
TTTTGAAACT AGGGGTGAAG ATGATATAGT GGAGCTCTTA TGTAAGATTG 
100
GCCAGACACA GATACCCTCC TCCGATCCTC TTCCCATTCT CCGTGGCAGC 
150
GGAAGTGGCG GACGAGAAGA AAATACTCCG CTTCCGCCTC CTCTGCCTCA 
200
TCAGAATCTC TTCATCCAGG AAGACGAAAT GTCTTCTTGG CCCCATCATC 
250
CACTCCGTCA AGATTATTTG TGCTCTGAAC TTTATGCTTC CACTCCGGCT 
300
CCTCATCCGC AGAGTTCCGT CTCTCTGGCA CCACCACCAC CAAAACCACC 
350
ATCCAGTGCT CCGTACGGTC AGATTATCGC TCCAAGAAGT GCTCCGAGAA 
400
TCCAGGGAAC TGAAGAAGCT CGAGGTTCAA CGTCTAGGAA GAGGTCACGA 
450
GCTGCAGAAA TGCATAACCT CGCCGAAAGG AGACGGAGAG AAAAGATCAA 
500
CGAGAGAATG AAGACTCTGC AACAACTCAT TCCTCGCTGC AACAAGTCTA 
550
CTAAAGTTTC AATGCTGGAA GATGTTATCG AGTACGTGAA ATCTCTAGAG 
600
ATGCAAATAA ATCAGTTCAT GCCCCACATG GCCATGGGTA TGAATCAGCC 
650
TCCTGCATAC ATACCTTTCC CTAGCCAGGC TCATATGGCG GGTGTAGGTC 
700
CATCATATCC ACCACCGCGA TACCCTTTTC CAAACATTCA GACCTTTGAC 
750
CCATCCAGAG TTTGGTTACA AAGTCCACAG CCTAACCCGG TGTCGAACCA 
800
ACCTCAGATG AATCCTTATG GTCAGTTTGT TGGTCACCAT CAGATGCAAC 
850
AATCTCTTCC TCCTCCATTG CAGGTAATTC TTTCCCAATA TCCATTGTGC 
900
TTATTCCTCT GTTCCAACAA ATGA
950

>AT4G28815.1 longest ORF length:307
MMIISSQILL LFGFKLFFET RGEDDIVELL CKIGQTQIPS SDPLPILRGS 
50
GSGGREENTP LPPPLPHQNL FIQEDEMSSW PHHPLRQDYL CSELYASTPA 
100
PHPQSSVSLA PPPPKPPSSA PYGQIIAPRS APRIQGTEEA RGSTSRKRSR 
150
AAEMHNLAER RRREKINERM KTLQQLIPRC NKSTKVSMLE DVIEYVKSLE 
200
MQINQFMPHM AMGMNQPPAY IPFPSQAHMA GVGPSYPPPR YPFPNIQTFD 
250
PSRVWLQSPQ PNPVSNQPQM NPYGQFVGHH QMQQSLPPPL QVILSQYPLC 
300
LFLCSNK
350