fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G29100 bHLH068 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT4G29100.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 1110
HindIII A|AGCTT 467
NcoI C|CATGG 405, 473
NdeI CA|TATG 136
PvuII CAG|CTG 37
StyI C|C[AT][AT]GG 405, 473, 748


Click here to view TAIR data

>AT4G29100.1 length:1224
ATGAATAGAG GTGTGTTGGA GAGTTCGCCG GTTCAGCAGC TGATGGCAGC 
50
CGGAAACCCT AATTGGTGGA ACGTAAGCGG CGGCATGAGG CCACCACCAC 
100
CGTTGATGGG TCATCAGCAG GCGCCGTTGC CACCACATAT GACTCCTAAT 
150
AACAATTATC TCCGACCACG GATGATGCCC ACTCCCTTCC CGCACTTCTT 
200
GCCATCTCCG GCGACTTCTT CTTCTTCCTC TTCTTCTTCA CCGTCTTTGC 
250
CTAATAACCC TAATCTCTCT TCTTGGCTTG AAAGCAATGA TCTCCCTCCT 
300
GAGTCTTGGA GCCTTAGCCA ACTTCTTTTG GGTGGATTGA TGATGGGAGA 
350
GGAAGAGAGA TTGGAGATGA TGAACCATCA TAATCATCAT GATGAACAAC 
400
AACACCATGG TTTTCAAGGG AAGATAAGAT TGGAGAATTG GGAAGAACAA 
450
GTGTTAAGCC ACCAACAAGC TTCCATGGTG GCTGTTGACA TCAAACAAGA 
500
GGGTAACATT AACAACAACA ATGGCTATGT CATATCTTCC CCGAACTCAC 
550
CTCCTAACAA ATCTTGTGTT ACAACAACTA CCACAACAAG CCTCAATAGT 
600
AACGACGATA ACATCAACAA CAATAATAAT ATGTTGGATT TCTCTAGCAA 
650
TCACAATGGT CTTCACTTGT CAGAAGGGAG ACACACTCCT CCGGATCGAT 
700
CCTCTGAGTG TAACAGCTTA GAGATTGGTG GGTCTACTAA TAAGAAGCCA 
750
AGGCTCCAAC CTTCTCCTTC GTCACAATCA ACCCTCAAGG TGAGAAAGGA 
800
GAAACTAGGA GGCCGAATCG CAGCGCTTCA TCAGCTAGTA TCTCCATTTG 
850
GAAAGACTGA CACAGCCTCT GTCCTGTCGG AAGCTATTGG ATACATTAGA 
900
TTCCTTCAGA GTCAAATTGA GGCTCTGAGT CATCCATACT TTGGTACGAC 
950
TGCCTCGGGG AATATGAGGC ACCAACAACA TTTGCAAGGA GATAGGAGTT 
1000
GCATATTTCC TGAGGACCCT GGTCAGCTCG TGAACGATCA GTGCATGAAG 
1050
AGAAGAGGAG CTTCGTCGTC ATCTACGGAC AATCAAAATG CAAGTGAAGA 
1100
GCCTAAGAAA GATCTGAGAA GTCGAGGTTT ATGTCTTGTC CCAATCTCAT 
1150
GCACACTCCA AGTAGGCAGC GACAACGGCG CGGACTATTG GGCTCCAGCA 
1200
CTTGGCTCCG CCGGTTTCCA TTGA
1250

>AT4G29100.1 longest ORF length:407
MNRGVLESSP VQQLMAAGNP NWWNVSGGMR PPPPLMGHQQ APLPPHMTPN 
50
NNYLRPRMMP TPFPHFLPSP ATSSSSSSSS PSLPNNPNLS SWLESNDLPP 
100
ESWSLSQLLL GGLMMGEEER LEMMNHHNHH DEQQHHGFQG KIRLENWEEQ 
150
VLSHQQASMV AVDIKQEGNI NNNNGYVISS PNSPPNKSCV TTTTTTSLNS 
200
NDDNINNNNN MLDFSSNHNG LHLSEGRHTP PDRSSECNSL EIGGSTNKKP 
250
RLQPSPSSQS TLKVRKEKLG GRIAALHQLV SPFGKTDTAS VLSEAIGYIR 
300
FLQSQIEALS HPYFGTTASG NMRHQQHLQG DRSCIFPEDP GQLVNDQCMK 
350
RRGASSSSTD NQNASEEPKK DLRSRGLCLV PISCTLQVGS DNGADYWAPA 
400
LGSAGFH
450