Locus |
Common name |
Short description |
AT4G29190 |
AtOZF2 |
Arabidopsis thaliana oxidation-related zinc finger 2, Zinc finger C-x8-C-x5-C-x3-H type family protein (.1) |
>AT4G29190.1 CDS map
>>Show genomic map

Uncut enzymes: Acc65I, AccI, AciI, AclI, AfeI, AflII, AflIII, AgeI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsmAI, BsmBI, BsmFI, BsmI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BstAPI, BstBI, BstEII, BstF5I, BstZ17I, Bsu36I, BtrI, BtsI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SspI, StuI, SwaI, TliI, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
730 |
AccII(FnuDII)
| CG|CG |
962 |
AccIII(BspMII)
| T|CCGGA |
174, 201, 500, 1011 |
AhdI
| GACNNN|NNGTC |
299, 588, 672 |
AluI
| AG|CT |
66, 127, 325, 454, 534, 615, 661, 945 |
AlwNI
| CAGNNN|CTG |
694, 847 |
ApoI
| Pu|AATTPy |
506, 750, 1020 |
AvaI
| C|PyCGPuG |
709 |
AvaII
| G|G[AT]CC |
198, 831 |
BamHI
| G|GATCC |
171, 1008 |
BanII
| GPuGCPy|C |
558 |
BfaI
| C|TAG |
603 |
BsaBI
| GATNN|NNATC |
1013 |
BsaHI
| GPu|CGPyC |
730 |
BsaJI
| C|CNNGG |
49, 343, 816, 835, 871, 1004 |
BsaWI
| [AT]|CCGG[AT] |
93, 168, 174, 201, 500, 528, 630, 1011 |
BsiHKAI
| G[AT]GC[AT]|C |
269 |
BsiWI
| C|GTACG |
305 |
BslI
| CCNNNNN|NNGG |
636, 798, 871, 1010, 1041 |
BsoBI
| C|PyCGPuG |
709 |
Bsp1286I
| G[GAT]GC[CAT]|C |
269, 558 |
BspDI
| AT|CGAT |
214, 822 |
BspEI
| T|CCGGA |
174, 201, 500, 1011 |
BspHI
| T|CATGA |
285 |
BsrFI
| Pu|CCGGPy |
54 |
BssKI
| |CCNGG |
185, 315, 834, 870, 1004 |
BssSI
| C|TCGTG |
272 |
BstNI
| CC|[AT]GG |
834, 870, 1004 |
BstUI
| CG|CG |
962 |
BstXI
| CCANNNNN|NTGG |
360 |
BstYI
| Pu|GATCPy |
171, 189, 339, 1008 |
BtgI
| C|CPuPyGG |
49, 816 |
Cac8I
| GCN|NGC |
119, 328 |
Cfr10I
| [AG]|CCGG[TC] |
54 |
ClaI
| AT|CGAT |
214, 822 |
DdeI
| C|TNAG |
469, 537, 688, 696 |
DpnI
| GA-CH3|TC |
4, 170, 188, 338, 530, 702, 819, 823, 992, 1007, 1013 |
DpnII
| |GATC |
4, 170, 188, 338, 530, 702, 819, 823, 992, 1007, 1013 |
EaeI
| Py|GGCCPu |
52, 276 |
EcoO109I
| PuG|GNCCPy |
832 |
Fnu4HI
| GC|NGC |
143, 394 |
HaeIII
| GG|CC |
51, 275 |
HhaI
| GCG|C |
961 |
HinP1I
| G|CGC |
961 |
HindIII
| A|AGCTT |
128 |
HinfI
| G|ANTC |
177, 204, 281, 408, 573, 596, 653, 666, 672, 686, 698, 802, 875, 933 |
HpaII
| C|CGG |
53, 92, 167, 173, 185, 200, 277, 315, 331, 499, 527, 629, 1010 |
Hpy188I
| TCN|GA |
7, 78, 341, 554, 593, 669, 680, 799, 1016, 1053 |
Hpy99I
| CG[AT]CG| |
76, 728 |
HpyCH4III
| ACN|GT |
33, 463, 484, 493, 755 |
HpyCH4IV
| A|CGT |
74, 582, 729 |
HpyCH4V
| TG|CA |
141, 395, 972, 986 |
MboI
| |GATC |
4, 170, 188, 338, 530, 702, 819, 823, 992, 1007, 1013 |
MseI
| T|TAA |
759 |
MspA1I
| C[AC]G|C[GT]G |
616 |
MspI
| C|CGG |
53, 92, 167, 173, 185, 200, 277, 315, 331, 499, 527, 629, 1010 |
MwoI
| GCNNNNN|NNGC |
152 |
N.BstNBI
| GAGTCNNNN|N |
182, 286, 658, 677, 703, 938 |
NciI
| CC|[CG]GG |
185, 315 |
NcoI
| C|CATGG |
49 |
NlaIII
| CATG| |
48, 118, 225, 284, 425, 988, 1063 |
NlaIV
| GGN|NCC |
171, 198, 557, 831, 1008, 1032 |
NspI
| PuCATG|Py |
119 |
PflFI
| GACN|NNGTC |
690 |
PpuMI
| PuG|G[AT]CCPy |
832 |
PspGI
| |CC[AT]GG |
834, 870, 1004 |
PvuII
| CAG|CTG |
616 |
RsaI
| GT|AC |
56, 244, 304, 349, 363, 465 |
Sau3AI
| |GATC |
4, 170, 188, 338, 530, 702, 819, 823, 992, 1007, 1013 |
Sau96I
| G|GNCC |
198, 831 |
ScrFI
| CC|NGG |
185, 315, 834, 870, 1004 |
SphI
| GCATG|C |
119 |
StyI
| C|C[AT][AT]GG |
49 |
Taqƒ¿I
| T|CGA |
213, 435, 620, 700, 719, 821, 994 |
TfiI
| G|A[AT]TC |
204, 573, 596, 802, 875 |
TseI
| G|C[AT]GC |
143, 394 |
Tsp45I
| |GT[CG]AC |
406, 692 |
Tsp509I
| |AATT |
505, 749, 761, 983, 1019 |
TspRI
| NNCA[CG]TGNN| |
34, 696 |
Tth111I
| GACN|NNGTC |
690 |
Click here to view TAIR data
>AT4G29190.1 length:1071
ATGATGATCG GAGAAACTCG CAGGACTTAT CCCACTGTTG AAATACCTCC | 50 |
ATGGCCGGTA CTTGAAGAGC TTACAACGTC GGAGTTTTTT TCTCCGGTGA | 100 |
TGAATAGTCC AGATTGTAGC ATGCTTGAAG CTTTGGCGGG GTTGCAGCGT | 150 |
TATTTGCCGT CTAACGAACC GGATCCGGAG TCATACCCGG ATCTATTGGG | 200 |
TCCGGATTCA CCAATCGATG CTTACTCATG CGACCATTTC CGTATGTACG | 250 |
ATTTCAAAGT CAGGAGGTGT GCTCGTGGCC GGAGTCATGA TTGGACGGAG | 300 |
TGTCCGTACG CTCATCCCGG AGAAAAAGCT CGCCGGAGAG ATCCGAGGAA | 350 |
GTACCATTAC TCTGGTACGG CTTGTCCTGA TTTTCGTAAA GGTGGCTGCA | 400 |
AGAAAGGTGA CTCTTGTGAG TTTGCTCATG GTGTTTTCGA GTGTTGGCTT | 450 |
CATCCAGCTC GTTACCGTAC TCAGCCGTGT AAAGACGGTG GTAACTGTCT | 500 |
CCGGAAAATT TGTTTCTTTG CTCATTCACC GGATCAGCTT AGGTTTTTAC | 550 |
ATACTCGGAG CCCTGACAGA GTTGATTCTT TTGACGTTTC GTCTCCGATT | 600 |
CGTGCTAGAG CATTTCAGCT GTCGATTTCT CCGGTTTCTG GTTCGCCACC | 650 |
GATGAGTCCA AGAGCTGACT CGGAGTCTTC TCCGATGACT CAGTCACTGA | 700 |
GTCGATCTCT CGGGTCTTGT TCGATAAACG ACGTCGTTCC TTCGTTTAGG | 750 |
AATTTACAGT TTAATTCGGT AAAATCATTT CCTCGTAACA ATCCTTTATT | 800 |
CGGATTCGGG TCGCCCCGTG GATCGATCTT GGGTCCTGGG TTTCAGTCTC | 850 |
TGCCTACAAC ACCGACCCGA CCAGGGAATC TGGATATTTG GGAGTATGGT | 900 |
TTGGAGGAAG AACCCGTAAT GGAGCGTGTC GTTGAGTCGG GTCGTGAGCT | 950 |
ACGAGAAAAG ATGCGCGAGA AACTGCACAA GGAGAATTGC ATGGATCGAG | 1000 |
TTGCCCAGGA TCCGGATCAG AATTTGGGTG AGGCTCCTGA TGTCGGGTGG | 1050 |
GTATCTGACC TGCTCATGTA A | 1100 |
>AT4G29190.1 longest ORF length:356
MMIGETRRTY PTVEIPPWPV LEELTTSEFF SPVMNSPDCS MLEALAGLQR | 50 |
YLPSNEPDPE SYPDLLGPDS PIDAYSCDHF RMYDFKVRRC ARGRSHDWTE | 100 |
CPYAHPGEKA RRRDPRKYHY SGTACPDFRK GGCKKGDSCE FAHGVFECWL | 150 |
HPARYRTQPC KDGGNCLRKI CFFAHSPDQL RFLHTRSPDR VDSFDVSSPI | 200 |
RARAFQLSIS PVSGSPPMSP RADSESSPMT QSLSRSLGSC SINDVVPSFR | 250 |
NLQFNSVKSF PRNNPLFGFG SPRGSILGPG FQSLPTTPTR PGNLDIWEYG | 300 |
LEEEPVMERV VESGRELREK MREKLHKENC MDRVAQDPDQ NLGEAPDVGW | 350 |
VSDLLM | 400 |
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