fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G29190 AtOZF2 Arabidopsis thaliana oxidation-related zinc finger 2, Zinc finger C-x8-C-x5-C-x3-H type family protein (.1)

>AT4G29190.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 171, 1008
HindIII A|AGCTT 128
NcoI C|CATGG 49
PvuII CAG|CTG 616
StyI C|C[AT][AT]GG 49


Click here to view TAIR data

>AT4G29190.1 length:1071
ATGATGATCG GAGAAACTCG CAGGACTTAT CCCACTGTTG AAATACCTCC 
50
ATGGCCGGTA CTTGAAGAGC TTACAACGTC GGAGTTTTTT TCTCCGGTGA 
100
TGAATAGTCC AGATTGTAGC ATGCTTGAAG CTTTGGCGGG GTTGCAGCGT 
150
TATTTGCCGT CTAACGAACC GGATCCGGAG TCATACCCGG ATCTATTGGG 
200
TCCGGATTCA CCAATCGATG CTTACTCATG CGACCATTTC CGTATGTACG 
250
ATTTCAAAGT CAGGAGGTGT GCTCGTGGCC GGAGTCATGA TTGGACGGAG 
300
TGTCCGTACG CTCATCCCGG AGAAAAAGCT CGCCGGAGAG ATCCGAGGAA 
350
GTACCATTAC TCTGGTACGG CTTGTCCTGA TTTTCGTAAA GGTGGCTGCA 
400
AGAAAGGTGA CTCTTGTGAG TTTGCTCATG GTGTTTTCGA GTGTTGGCTT 
450
CATCCAGCTC GTTACCGTAC TCAGCCGTGT AAAGACGGTG GTAACTGTCT 
500
CCGGAAAATT TGTTTCTTTG CTCATTCACC GGATCAGCTT AGGTTTTTAC 
550
ATACTCGGAG CCCTGACAGA GTTGATTCTT TTGACGTTTC GTCTCCGATT 
600
CGTGCTAGAG CATTTCAGCT GTCGATTTCT CCGGTTTCTG GTTCGCCACC 
650
GATGAGTCCA AGAGCTGACT CGGAGTCTTC TCCGATGACT CAGTCACTGA 
700
GTCGATCTCT CGGGTCTTGT TCGATAAACG ACGTCGTTCC TTCGTTTAGG 
750
AATTTACAGT TTAATTCGGT AAAATCATTT CCTCGTAACA ATCCTTTATT 
800
CGGATTCGGG TCGCCCCGTG GATCGATCTT GGGTCCTGGG TTTCAGTCTC 
850
TGCCTACAAC ACCGACCCGA CCAGGGAATC TGGATATTTG GGAGTATGGT 
900
TTGGAGGAAG AACCCGTAAT GGAGCGTGTC GTTGAGTCGG GTCGTGAGCT 
950
ACGAGAAAAG ATGCGCGAGA AACTGCACAA GGAGAATTGC ATGGATCGAG 
1000
TTGCCCAGGA TCCGGATCAG AATTTGGGTG AGGCTCCTGA TGTCGGGTGG 
1050
GTATCTGACC TGCTCATGTA A
1100

>AT4G29190.1 longest ORF length:356
MMIGETRRTY PTVEIPPWPV LEELTTSEFF SPVMNSPDCS MLEALAGLQR 
50
YLPSNEPDPE SYPDLLGPDS PIDAYSCDHF RMYDFKVRRC ARGRSHDWTE 
100
CPYAHPGEKA RRRDPRKYHY SGTACPDFRK GGCKKGDSCE FAHGVFECWL 
150
HPARYRTQPC KDGGNCLRKI CFFAHSPDQL RFLHTRSPDR VDSFDVSSPI 
200
RARAFQLSIS PVSGSPPMSP RADSESSPMT QSLSRSLGSC SINDVVPSFR 
250
NLQFNSVKSF PRNNPLFGFG SPRGSILGPG FQSLPTTPTR PGNLDIWEYG 
300
LEEEPVMERV VESGRELREK MREKLHKENC MDRVAQDPDQ NLGEAPDVGW 
350
VSDLLM
400