fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G29230 ANAC075, NST9 NAC domain containing protein 75 (.1)

>AT4G29230.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 79
BglII A|GATCT 632
EcoRI G|AATTC 244
EcoRV GAT|ATC 1152
HindIII A|AGCTT 951
NdeI CA|TATG 748, 1066
PvuII CAG|CTG 875, 896
SpeI A|CTAGT 772
StyI C|C[AT][AT]GG 652
XbaI T|CTAGA 796


Click here to view TAIR data

>AT4G29230.1 length:1497
ATGAACAAGA GTAATCCTGC TGGTTCGGTG ACTGGTTCGG ATATAATAGA 
50
CGCCAAGATC GAAGAACATC AACTTTGTGG ATCCAAGAAG TGTCCTAGCT 
100
GCGGCCACAA GCTCGAAGGC AAACCACAGG ATTGGGTTGG TTTACCAGCA 
150
GGAGTGAAAT TTGACCCAAC GGATCAAGAA TTGATAGAAC ATTTAGAAGC 
200
GAAAGTGTTA GCTAAAGACT TCAAATCTCA CCCTCTCATT GACGAATTCA 
250
TCCCAACCAT TGAAGGCGAA GACGGCATTT GCTACACTCA TCCCGAGAAA 
300
CTTCCTGGAG TGACTAGAGA TGGTTTAAGC CGACACTTCT TTCATAGACC 
350
ATCAAAGGCG TACACGACGG GAACAAGAAA GCGAAGAAAG ATTCAAACAG 
400
AATGTGACAA TAATTTGCAA GGAAGTAGTA GCTCCGGTGA GACGAGGTGG 
450
CATAAGACCG GTAAGACAAG ACCGGTTATG GTAAACGGTA AGCAAAAAGG 
500
TTGTAAGAAG ATTTTGGTTT TGTATACCAA TTTTGGTAAG AATCGAAAAC 
550
CGGAGAAAAC CAATTGGGTA ATGCATCAAT ATCATTTGGG GACACATGAG 
600
GAAGAGAAAG AAGGAGAACT TGTTGTGTCT AAGATCTTTT ATCAAACTCA 
650
GCCTAGGCAA TGCAACTGGT CGTCTTCTAC ATCGAGCTTG AACGCTATAG 
700
GTGGTGGCGG CGGTGAAGCG AGTAGCGGCG GAGGCGGCGG AGAGTATCAT 
750
ATGAGGAGAG ATAGTGGGAC TACTAGTGGT GGGAGTTGTT CTTCGTCTAG 
800
AGAAATTATT AATGTTAATC CTCCGAATCG ATCCGATGAA ATAGGCGGCG 
850
TTGGTGGTGG CGTTATGGCC GTAGCAGCTG CGGCTGCGGC GGTTGCAGCT 
900
GGGCTTCCGA GTTATGCAAT GGATCAGCTC AGCTTTGTTC CGTTTATGAA 
950
AAGCTTTGAT GAGGTGGCGA GGAGGGAAAC TCCTCAGACT GGGCACGCTA 
1000
CATGTGAGGA TGTAATGGCA GAACAACATC GTCATCGTCA TCAACCATCA 
1050
TCATCAACAT CACATCATAT GGCTCATGAT CATCACCATC ATCATCATCA 
1100
ACAACAACAA CAACGGCATC ATGCATTCAA CATAAGCCAG CCTACACATC 
1150
CGATATCAAC CATTATTTCT CCATCTACTT CGCTTCACCA TGCCTCCATT 
1200
AATATTCTTG ACGATAATCC TTATCATGTT CATAGAATCT TGCTCCCCAA 
1250
TGAAAATTAC CAGACACAAC AGCAACTACG TCAAGAAGGA GAAGAAGAAC 
1300
ATAATGATGG GAAGATGGGA GGAAGGTCAG CTTCCGGATT GGAAGAACTC 
1350
ATAATGGGCT GCACTTCTTC TACCACTCAT CATGATGTAA AAGATGGGTC 
1400
ATCATCAATG GGGAACCAAC AAGAAGCAGA ATGGTTGAAG TACTCAACGT 
1450
TTTGGCCAGC CCCTGACTCT TCTGACAACC AAGATCATCA TGGGTAA
1500

>AT4G29230.1 longest ORF length:498
MNKSNPAGSV TGSDIIDAKI EEHQLCGSKK CPSCGHKLEG KPQDWVGLPA 
50
GVKFDPTDQE LIEHLEAKVL AKDFKSHPLI DEFIPTIEGE DGICYTHPEK 
100
LPGVTRDGLS RHFFHRPSKA YTTGTRKRRK IQTECDNNLQ GSSSSGETRW 
150
HKTGKTRPVM VNGKQKGCKK ILVLYTNFGK NRKPEKTNWV MHQYHLGTHE 
200
EEKEGELVVS KIFYQTQPRQ CNWSSSTSSL NAIGGGGGEA SSGGGGGEYH 
250
MRRDSGTTSG GSCSSSREII NVNPPNRSDE IGGVGGGVMA VAAAAAAVAA 
300
GLPSYAMDQL SFVPFMKSFD EVARRETPQT GHATCEDVMA EQHRHRHQPS 
350
SSTSHHMAHD HHHHHHQQQQ QRHHAFNISQ PTHPISTIIS PSTSLHHASI 
400
NILDDNPYHV HRILLPNENY QTQQQLRQEG EEEHNDGKMG GRSASGLEEL 
450
IMGCTSSTTH HDVKDGSSSM GNQQEAEWLK YSTFWPAPDS SDNQDHHG
500