fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G29930 bHLH027 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>AT4G29930.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 6
HindIII A|AGCTT 193
SpeI A|CTAGT 727
XbaI T|CTAGA 315, 757


Click here to view TAIR data

>AT4G29930.3 length:792
ATGGAAGATC TCGACCATGA GTACAAGAAT TACTGGGAAA CCACAATGTT 
50
CTTCCAGAAT CAAGAACTCG AATTTGACAG TTGGCCGATG GAGGAAGCGT 
100
TTTCGGGTTC CGGCGAGTCG AGTTCGCCAG ACGGAGCGGC AACGTCGCCG 
150
GCTTCTTCGA AGAACGTTGT CTCCGAGAGA AACAGACGGC AAAAGCTTAA 
200
TCAGAGACTT TTTGCTCTCC GGTCAGTTGT TCCCAATATA AGCAAGTTGG 
250
ACAAGGCATC TGTCATCAAA GATTCTATCG ACTATATGCA AGAACTTATT 
300
GATCAAGAGA AGACTCTAGA AGCAGAGATC AGAGAGCTAG AATCACGGTC 
350
AACATTGCTA GAAAATCCGG TAAGAGATTA CGATTGCAAT TTTGCGGAAA 
400
CTCATCTGCA AGATTTCTCA GACAATAATG ACATGAGATC AAAAAAGTTT 
450
AAGCAGATGG ATTACAGTAC TAGAGTACAA CACTACCCCA TTGAAGTTCT 
500
CGAAATGAAA GTGACATGGA TGGGAGAGAA GACGGTAGTG GTATGCATAA 
550
CATGTAGCAA GAAAAGAGAG ACAATGGTGC AGCTTTGTAA AGTGTTGGAG 
600
TCTTTGAATC TCAACATTCT CACTACTAAC TTCTCTTCCT TCACCTCTCG 
650
TCTCTCCACC ACCCTCTTCC TCCAGGTCAC TCTCTCCCTC TCTCCCTCTC 
700
TCATATCTTT ATTTGGCAAT GTGATTACTA GTACAAACTA CAAAATTCTA 
750
AATGCATCTA GAGAATACTG TACGTGTCTT GTTTTGGTTT GA
800

>AT4G29930.3 longest ORF length:263
MEDLDHEYKN YWETTMFFQN QELEFDSWPM EEAFSGSGES SSPDGAATSP 
50
ASSKNVVSER NRRQKLNQRL FALRSVVPNI SKLDKASVIK DSIDYMQELI 
100
DQEKTLEAEI RELESRSTLL ENPVRDYDCN FAETHLQDFS DNNDMRSKKF 
150
KQMDYSTRVQ HYPIEVLEMK VTWMGEKTVV VCITCSKKRE TMVQLCKVLE 
200
SLNLNILTTN FSSFTSRLST TLFLQVTLSL SPSLISLFGN VITSTNYKIL 
250
NASREYCTCL VLV
300