fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G29930 bHLH027 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>AT4G29930.4 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 6
HindIII A|AGCTT 193
XbaI T|CTAGA 315


Click here to view TAIR data

>AT4G29930.4 length:555
ATGGAAGATC TCGACCATGA GTACAAGAAT TACTGGGAAA CCACAATGTT 
50
CTTCCAGAAT CAAGAACTCG AATTTGACAG TTGGCCGATG GAGGAAGCGT 
100
TTTCGGGTTC CGGCGAGTCG AGTTCGCCAG ACGGAGCGGC AACGTCGCCG 
150
GCTTCTTCGA AGAACGTTGT CTCCGAGAGA AACAGACGGC AAAAGCTTAA 
200
TCAGAGACTT TTTGCTCTCC GGTCAGTTGT TCCCAATATA AGCAAGTTGG 
250
ACAAGGCATC TGTCATCAAA GATTCTATCG ACTATATGCA AGAACTTATT 
300
GATCAAGAGA AGACTCTAGA AGCAGAGATC AGAGAGCTAG AATCACGGTC 
350
AACATTGCTA GAAAATCCGG TAAGAGATTA CGATTGCAAT TTTGCGGAAA 
400
CTCATCTGCA AGATTTCTCA GACAATAATG ACATGAGATC AAAAAAGTTT 
450
AAGCAGATGG ATTACAGTAC TAGAGTACAA CACTACCCCA TTGAAGTTCT 
500
CGAAGTACGT ACTATGCATT ATTTGGCAGT ACATTCTAAA TTACCTTTCT 
550
TTTGA
600

>AT4G29930.4 longest ORF length:184
MEDLDHEYKN YWETTMFFQN QELEFDSWPM EEAFSGSGES SSPDGAATSP 
50
ASSKNVVSER NRRQKLNQRL FALRSVVPNI SKLDKASVIK DSIDYMQELI 
100
DQEKTLEAEI RELESRSTLL ENPVRDYDCN FAETHLQDFS DNNDMRSKKF 
150
KQMDYSTRVQ HYPIEVLEVR TMHYLAVHSK LPFF
200