Locus |
Common name |
Short description |
AT4G30180 |
bHLH146 |
sequence-specific DNA binding transcription factors;transcription regulators (.1) |
>AT4G30180.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
275 |
HindIII
| A|AGCTT |
355 |
PstI
| CTGCA|G |
217 |
SpeI
| A|CTAGT |
256 |
Click here to view TAIR data
>AT4G30180.1 length:477
ATGGAGAGGC AAATCATAAA CAGGAAGAAA CGAGTGTTTT CTCTTGAACC | 50 |
AAACAAGAAC CCTAGTGCAG TTTTCACGAG AAAATACACA AGCCACTTGG | 100 |
TTCCTGCACT CAAGAAGCTC AACATGAACA AGAACTCTTC AAAACAAACC | 150 |
GTGAAGCATG AAGTAGATAT GGCTTTGGCT TTGTCTGCTC AAGAATTTGC | 200 |
ATGGAGCCGT TTCTTGCTGC AGAAGCTATC GTCCTCATCG AATCCAACCA | 250 |
CTACCACTAG TTCTTCTTCC GATGGAATTC GGATTCTTGA AAGACCCGAT | 300 |
AAAGAAGGCG GAAACGAAGA AGGAGGGATA GAGGAGAGAC TGAGGGAATT | 350 |
GAAGAAGCTT TTGCCAGGTG GGGAAGAGAT GAATGTGGAA GAAATGTTGA | 400 |
GTGAGATTGG TAACTACATT AAATGTCTTG AGTTGCAGAC GATTGCTCTC | 450 |
AAGTCCATTG TTCAAGATAG TACTTGA | 500 |
>AT4G30180.1 longest ORF length:158
MERQIINRKK RVFSLEPNKN PSAVFTRKYT SHLVPALKKL NMNKNSSKQT | 50 |
VKHEVDMALA LSAQEFAWSR FLLQKLSSSS NPTTTTSSSS DGIRILERPD | 100 |
KEGGNEEGGI EERLRELKKL LPGGEEMNVE EMLSEIGNYI KCLELQTIAL | 150 |
KSIVQDST | 200 |
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