fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G30180 bHLH146 sequence-specific DNA binding transcription factors;transcription regulators (.1)

>AT4G30180.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 275
HindIII A|AGCTT 355
PstI CTGCA|G 217
SpeI A|CTAGT 256


Click here to view TAIR data

>AT4G30180.1 length:477
ATGGAGAGGC AAATCATAAA CAGGAAGAAA CGAGTGTTTT CTCTTGAACC 
50
AAACAAGAAC CCTAGTGCAG TTTTCACGAG AAAATACACA AGCCACTTGG 
100
TTCCTGCACT CAAGAAGCTC AACATGAACA AGAACTCTTC AAAACAAACC 
150
GTGAAGCATG AAGTAGATAT GGCTTTGGCT TTGTCTGCTC AAGAATTTGC 
200
ATGGAGCCGT TTCTTGCTGC AGAAGCTATC GTCCTCATCG AATCCAACCA 
250
CTACCACTAG TTCTTCTTCC GATGGAATTC GGATTCTTGA AAGACCCGAT 
300
AAAGAAGGCG GAAACGAAGA AGGAGGGATA GAGGAGAGAC TGAGGGAATT 
350
GAAGAAGCTT TTGCCAGGTG GGGAAGAGAT GAATGTGGAA GAAATGTTGA 
400
GTGAGATTGG TAACTACATT AAATGTCTTG AGTTGCAGAC GATTGCTCTC 
450
AAGTCCATTG TTCAAGATAG TACTTGA
500

>AT4G30180.1 longest ORF length:158
MERQIINRKK RVFSLEPNKN PSAVFTRKYT SHLVPALKKL NMNKNSSKQT 
50
VKHEVDMALA LSAQEFAWSR FLLQKLSSSS NPTTTTSSSS DGIRILERPD 
100
KEGGNEEGGI EERLRELKKL LPGGEEMNVE EMLSEIGNYI KCLELQTIAL 
150
KSIVQDST
200