fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G31060 Integrase-type DNA-binding superfamily protein (.1)

>AT4G31060.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
PstI CTGCA|G 479
SacI GAGCT|C 50


Click here to view TAIR data

>AT4G31060.1 length:564
ATGCCACCCT CTCCTCCTAA ATCTCCTTTT ATTAGCTCTT CACTCAAAGG 
50
AGCTCATGAA GATCGCAAAT TTAAATGCTA TAGGGGTGTC CGAAAGAGGT 
100
CTTGGGGCAA ATGGGTGTCT GAAATCAGAG TTCCAAAGAC TGGACGACGA 
150
ATATGGCTAG GTTCATACGA TGCTCCAGAG AAGGCAGCTA GAGCCTATGA 
200
TGCTGCTTTG TTCTGTATTA GGGGTGAGAA GGGAGTTTAC AATTTTCCCA 
250
CTGATAAAAA GCCGCAGCTT CCAGAAGGTT CTGTCCGGCC TCTGTCCAAG 
300
CTCGACATAC AGACAATAGC AACAAACTAT GCTTCATCAG TTGTGCATGT 
350
ACCTTCCCAT GCCACCACAC TCCCGGCAAC AACCCAGGTT CCCTCTGAAG 
400
TTCCTGCTTC CTCTGATGTT TCTGCTTCTA CTGAGATTAC AGAGATGGTC 
450
GATGAATATT ATCTCCCAAC CGATGCAACT GCAGAATCAA TATTCTCAGT 
500
TGAAGACTTA CAACTGGACA GTTTCCTCAT GATGGACATT GATTGGATAA 
550
ACAATCTAAT CTGA
600

>AT4G31060.1 longest ORF length:187
MPPSPPKSPF ISSSLKGAHE DRKFKCYRGV RKRSWGKWVS EIRVPKTGRR 
50
IWLGSYDAPE KAARAYDAAL FCIRGEKGVY NFPTDKKPQL PEGSVRPLSK 
100
LDIQTIATNY ASSVVHVPSH ATTLPATTQV PSEVPASSDV SASTEITEMV 
150
DEYYLPTDAT AESIFSVEDL QLDSFLMMDI DWINNLI
200