fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G31420 Zinc finger protein 622 (.1.2)

>AT4G31420.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 525, 636
EcoRI G|AATTC 979
NdeI CA|TATG 748
SacI GAGCT|C 919
StyI C|C[AT][AT]GG 239, 660


Click here to view TAIR data

>AT4G31420.1 length:1215
ATGCCTGGTT TAACATGTAA CGCGTGTAAC ATGGAGTTCA AGGACGAAGA 
50
AGAACGTAAC CTTCATTACA AATCCGATTG GCACCGCTAC AATCTCAAGC 
100
GCAAGGTGGC TGGAGTTCCT GGAGTTACAG AAGCCTTGTT TGAGGCTAGA 
150
CAATCTGCTC TTGCTCAGGA GAAGAATAAA TCAAATGAAG CACCTATGCT 
200
TTATACTTGT GCAATCTGTG CTAAAGGTTA CAGGAGTTCC AAGGCTCATG 
250
AGCAGCATCT TCAGTCGCGT AGCCATGTTT TGCGGGTTTC ACAAGGGACA 
300
TCAATCAACG GAGAGGAGGA TATAGCGATT ATCAGGCAAC TTCCTCGCCG 
350
TGTTCAACAC AGGGGTTCCA TTGATGATGA TAGTGAAGAT GAATGGGTGG 
400
AGGTTGATTC TGACGAGGAA TTGGCTGCTG AAGAAGCCTC TGATTCTTTG 
450
TCTAAGTTGA ATGTGAATGA GTCTGGATCT GCTGAAGATA TGGATGATGA 
500
TGGTGATGCA GATAAGTATG AGCTGGATCC AACCTGCTGT TTGATGTGTG 
550
ACAAAAAACA TAAGACCTTA GAGAGCTGTA TGCTTCACAT GCATAAGCAT 
600
CATGGTTTCT TTATTCCCGA TATTGAGTAT CTCAAGGATC CTGAAGGGCT 
650
TCTCACTTAC CTTGGTCTTA AGGTCAAGAG AGACTTCATG TGTCTGTACT 
700
GCAATGAGCT GTGCCGTCCA TTCAGCAGCT TAGAAGCTGT AAGAAAACAT 
750
ATGGAAGCAA AGAGTCATTG CAAACTGCAT TATGGTGATG GTGATGATGA 
800
AGAAGATGCT GAGCTAGAAG AGTTTTATGA CTACAGCAGC AGCTATGTTG 
850
ATGAAGCTGG AAAGCAAATT GTTGTATCTG GTGAAACAGA CAATACTGTA 
900
GAACTCGTTG GTGGTTCTGA GCTCTTGATC ACGGAGAAGT CCGAGAACAC 
950
AACAACGTCT AAAACTCTCG GGTCCCGTGA ATTCATGCGT TACTACAGAC 
1000
AGAAGCCACG CCCAACTTCT CAAGACAGCA ACCAGATAAT TGCCTCTTTA 
1050
TCTTCAAGGT ACAAGAGCCT GGGTCTGAAG ACAGTACCGT CGAAAGAGGA 
1100
GACTTTGAGG ATGAAAGTGC GCAAGGAGAT GAGCAAGAGA GGCGAGACAA 
1150
TGCGTACCAA GATCGGAGTG AAGAGTAATG TCATAAGAAA CTTGCCCAAT 
1200
AACGTCCCAT ATTAG
1250

>AT4G31420.1 longest ORF length:404
MPGLTCNACN MEFKDEEERN LHYKSDWHRY NLKRKVAGVP GVTEALFEAR 
50
QSALAQEKNK SNEAPMLYTC AICAKGYRSS KAHEQHLQSR SHVLRVSQGT 
100
SINGEEDIAI IRQLPRRVQH RGSIDDDSED EWVEVDSDEE LAAEEASDSL 
150
SKLNVNESGS AEDMDDDGDA DKYELDPTCC LMCDKKHKTL ESCMLHMHKH 
200
HGFFIPDIEY LKDPEGLLTY LGLKVKRDFM CLYCNELCRP FSSLEAVRKH 
250
MEAKSHCKLH YGDGDDEEDA ELEEFYDYSS SYVDEAGKQI VVSGETDNTV 
300
ELVGGSELLI TEKSENTTTS KTLGSREFMR YYRQKPRPTS QDSNQIIASL 
350
SSRYKSLGLK TVPSKEETLR MKVRKEMSKR GETMRTKIGV KSNVIRNLPN 
400
NVPY
450