Locus |
Common name |
Short description |
AT4G31630 |
REM4 |
Transcriptional factor B3 family protein (.1) |
>AT4G31630.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtsI, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, , NarI, NcoI, NdeI, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsaI, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
187, 1076 |
AflIII
| A|CPuPyGT |
516, 944 |
AluI
| AG|CT |
34, 724, 747, 780, 1117, 1315, 1470, 1498 |
AlwNI
| CAGNNN|CTG |
165 |
ApoI
| Pu|AATTPy |
449, 565 |
AvaII
| G|G[AT]CC |
1173 |
BalI
| TGG|CCA |
1230 |
BamHI
| G|GATCC |
6 |
BanII
| GPuGCPy|C |
1316, 1471 |
BclI
| T|GATCA |
1404 |
BfaI
| C|TAG |
798, 1058, 1353, 1493 |
BglII
| A|GATCT |
51, 1193 |
BsaAI
| PyAC|GTPu |
943 |
BsaJI
| C|CNNGG |
1202 |
BsiHKAI
| G[AT]GC[AT]|C |
1316, 1471 |
BslI
| CCNNNNN|NNGG |
205, 1262, 1453 |
Bsp1286I
| G[GAT]GC[CAT]|C |
1316, 1471 |
BsrFI
| Pu|CCGGPy |
199 |
BsrI
| ACTGGN| |
167, 667, 1278 |
BssKI
| |CCNGG |
1365 |
BstF5I
| GGATGNN| |
206, 619, 692 |
BstUI
| CG|CG |
187, 1076 |
BstYI
| Pu|GATCPy |
6, 51, 730, 1193 |
BtrI
| CAC|GTC |
286, 517 |
Cac8I
| GCN|NGC |
199 |
Cfr10I
| [AG]|CCGG[TC] |
199 |
DdeI
| C|TNAG |
88, 313, 612, 877, 887, 1327 |
DpnI
| GA-CH3|TC |
5, 50, 608, 718, 729, 929, 997, 1079, 1142, 1192, 1265, 1361, 1403, 1531 |
DpnII
| |GATC |
5, 50, 608, 718, 729, 929, 997, 1079, 1142, 1192, 1265, 1361, 1403, 1531 |
EaeI
| Py|GGCCPu |
1230 |
EcoRV
| GAT|ATC |
420 |
Fnu4HI
| GC|NGC |
1215, 1348, 1376 |
HaeIII
| GG|CC |
1229, 1338 |
HhaI
| GCG|C |
186 |
HinP1I
| G|CGC |
186 |
HincII
| GTPy|PuAC |
126, 1063 |
HindIII
| A|AGCTT |
35, 748, 1499 |
HinfI
| G|ANTC |
14, 101, 119, 193, 483, 638, 873, 905, 917, 1490 |
HpaI
| GTT|AAC |
1063 |
HpaII
| C|CGG |
198, 259, 1364 |
Hpy188I
| TCN|GA |
147, 156, 298, 314, 342, 423, 492, 538, 611, 849, 876, 888, 908, 920, 1224, 1401, 1467, 1534 |
Hpy99I
| CG[AT]CG| |
242, 266, 389, 454 |
HpyCH4III
| ACN|GT |
320, 366, 1020 |
HpyCH4IV
| A|CGT |
171, 285, 301, 516, 923, 942, 1407 |
HpyCH4V
| TG|CA |
511, 568, 973, 1374, 1506 |
MboI
| |GATC |
5, 50, 608, 718, 729, 929, 997, 1079, 1142, 1192, 1265, 1361, 1403, 1531 |
MscI
| TGG|CCA |
1230 |
MseI
| T|TAA |
323, 557, 744, 933, 1062, 1410, 1442 |
MslI
| CAPyNN|NNPuTG |
110 |
MspA1I
| C[AC]G|C[GT]G |
781 |
MspI
| C|CGG |
198, 259, 1364 |
MwoI
| GCNNNNN|NNGC |
195, 981, 1278, 1382 |
N.BstNBI
| GAGTCNNNN|N |
488 |
NaeI
| GCC|GGC |
199 |
NciI
| CC|[CG]GG |
1365 |
NgoMIV
| G|CCGGC |
199 |
NlaIII
| CATG| |
274, 623, 954 |
NlaIV
| GGN|NCC |
6 |
PvuII
| CAG|CTG |
781 |
SacI
| GAGCT|C |
1316, 1471 |
Sau3AI
| |GATC |
5, 50, 608, 718, 729, 929, 997, 1079, 1142, 1192, 1265, 1361, 1403, 1531 |
Sau96I
| G|GNCC |
1173, 1338 |
ScrFI
| CC|NGG |
1365 |
SfcI
| C|TPuPyAG |
738, 778 |
SgrAI
| CPu|CCGGPyG |
200 |
SmlI
| C|TPyPuAG |
1189, 1319, 1474 |
StyI
| C|C[AT][AT]GG |
1202 |
Taqƒ¿I
| T|CGA |
416, 455, 1165, 1305 |
TfiI
| G|A[AT]TC |
14, 101, 119, 193, 873, 905, 917, 1490 |
TseI
| G|C[AT]GC |
1215, 1348, 1376 |
Tsp45I
| |GT[CG]AC |
519 |
Tsp509I
| |AATT |
177, 413, 448, 564, 853, 881, 960, 1183, 1513 |
TspRI
| NNCA[CG]TGNN| |
12, 367, 1278 |
XbaI
| T|CTAGA |
1494 |
XmnI
| GAANN|NNTTC |
106, 214, 819, 846 |
Click here to view TAIR data
>AT4G31630.1 length:1539
ATGGCGGATC CACTGATTCC CTCCCCAACC AACAAAGCTT TCTTCATCAT | 50 |
AGATCTATCT GGACAAAAAT CCAATCCTAT CATTCCTACT GAGTTCATTT | 100 |
GGAATCACTT CAATGGTAAG ATTCAGTCAA CGAATATGAA ACTAACTTCT | 150 |
GACGCTTCGG ACAGAAACTG GGACGTGAAA TTGGACGGCG CGAGATTCGC | 200 |
CGGCGGATGG AAAGATTTCT CCGTCTCCCA CTCTGTTAGA GACGACGACC | 250 |
TTTTGAGTTT CCGGCACGAC GGAGGCATGG TCTTCCACGT CTCACCCTTC | 300 |
GGACGTAGTT TCTCTCAGAT ACAGTTAATC TCTTCTTCTA CCTCTGACGA | 350 |
TGATGATGAT GAACGCACTG TTTTTGATGA TGATGAAGAC GACGATGTAG | 400 |
GAGATGATGA TGACAATTCG ATATCCGAAG ATGATTTTTG TTCAAAGAAA | 450 |
ATTTCGTCGA AGAAGAGAGC AAGAAAAGAA ACAGAGTCTT CATCAGACAA | 500 |
ATCTTATCTT GTTGCACACG TCACACCTTC AAGCCTACTC CGAGATAATA | 550 |
TGTGTGTTTT AAGCAAATTT GCAAGGTCAA ATGGTCTGGA CAGGAGAGAG | 600 |
TGTGAGATTG ATCTGAGGGA TGAACATGAA AAATCTTGGA CTCTGCTTTT | 650 |
GAGACACAAC AAAAAAACTG GTCAGGCTTT TATGCGTGGA GGATGGAGAA | 700 |
GTTTTTGTCG TAATAACGGG ATCAAAGCTG GATCTATCTG TAGGTTTAAG | 750 |
CTTGTCCAAA GCGGAATAAA ACCTGTGCTA CAGCTGTGTC CCAACGCCTC | 800 |
TAGCATTCCA GAAGGAAACT CTTCCAAAGC AAGAAAAAAA CGAAATGTTT | 850 |
CTGAAATTGA AGGTGATGAG ATAGAATCTG AGAATTGCTC AGAGACTATT | 900 |
CCATTGAATC AGAACAAGAT TCTGACGTTT GATCTTAAAC CTTACGTGTT | 950 |
CAGGTCATGT CAATTTTTTC TTCCTGCATC GTTCGCAAGA GAGAACGGGA | 1000 |
TCGTGGAAGC AGGAGAGGTA ACTGTATTGA ACAAAGATGG CATAGAGTGG | 1050 |
AAGTCGCATC TAGTTAACAT CAAGGGACGC GATCAGTTTT ACAATAGAGG | 1100 |
TTGTCAAGAT TTCTTTGTAG CTAATGGCGT AAAGAATGTT GGTGATCCCT | 1150 |
TCACATTGGA GGTTATTCGA GGAGGACCAT CTCCAATTCT CAAGATCTGT | 1200 |
TCCAAGGTGA AACAAGCAGC ATCATCTGAT GGCCATAAGA CTGCGGATAG | 1250 |
GAAACCCCGA ATGACGGATC AAGCACCACT GGCTGAAGAA CAAACTGATA | 1300 |
ATCGGGTCGA AAAGAGAGCT CAAGTTACTG AGGAAGGAGG GCCATCTCGC | 1350 |
AGCACTAGGG CTGATCCGGG AAACTTGCAG CAAAAGCAAC CTTGCTCAAT | 1400 |
ATCTGATCAC GTTAAAAAGG TGAAACAGAG TATTGTGGAT ACTTTAACCG | 1450 |
ATGTAAGGCG GTTTCAGTCG GAGCTCAAGG TAAAAGAACA GAATCTAGAA | 1500 |
GCTTCATTGC AAGAAATTGA TGCGTTAGGT ATGATCTGA | 1550 |
>AT4G31630.1 longest ORF length:512
MADPLIPSPT NKAFFIIDLS GQKSNPIIPT EFIWNHFNGK IQSTNMKLTS | 50 |
DASDRNWDVK LDGARFAGGW KDFSVSHSVR DDDLLSFRHD GGMVFHVSPF | 100 |
GRSFSQIQLI SSSTSDDDDD ERTVFDDDED DDVGDDDDNS ISEDDFCSKK | 150 |
ISSKKRARKE TESSSDKSYL VAHVTPSSLL RDNMCVLSKF ARSNGLDRRE | 200 |
CEIDLRDEHE KSWTLLLRHN KKTGQAFMRG GWRSFCRNNG IKAGSICRFK | 250 |
LVQSGIKPVL QLCPNASSIP EGNSSKARKK RNVSEIEGDE IESENCSETI | 300 |
PLNQNKILTF DLKPYVFRSC QFFLPASFAR ENGIVEAGEV TVLNKDGIEW | 350 |
KSHLVNIKGR DQFYNRGCQD FFVANGVKNV GDPFTLEVIR GGPSPILKIC | 400 |
SKVKQAASSD GHKTADRKPR MTDQAPLAEE QTDNRVEKRA QVTEEGGPSR | 450 |
STRADPGNLQ QKQPCSISDH VKKVKQSIVD TLTDVRRFQS ELKVKEQNLE | 500 |
ASLQEIDALG MI | 550 |
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