fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G31630 REM4 Transcriptional factor B3 family protein (.1)

>AT4G31630.1 CDS map

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Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtsI, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, , NarI, NcoI, NdeI, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsaI, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XcmI, XhoI, XmaI
Name Recognition sequence Cut positions
AccII(FnuDII) CG|CG 187, 1076
AflIII A|CPuPyGT 516, 944
AluI AG|CT 34, 724, 747, 780, 1117, 1315, 1470, 1498
AlwNI CAGNNN|CTG 165
ApoI Pu|AATTPy 449, 565
AvaII G|G[AT]CC 1173
BalI TGG|CCA 1230
BamHI G|GATCC 6
BanII GPuGCPy|C 1316, 1471
BclI T|GATCA 1404
BfaI C|TAG 798, 1058, 1353, 1493
BglII A|GATCT 51, 1193
BsaAI PyAC|GTPu 943
BsaJI C|CNNGG 1202
BsiHKAI G[AT]GC[AT]|C 1316, 1471
BslI CCNNNNN|NNGG 205, 1262, 1453
Bsp1286I G[GAT]GC[CAT]|C 1316, 1471
BsrFI Pu|CCGGPy 199
BsrI ACTGGN| 167, 667, 1278
BssKI |CCNGG 1365
BstF5I GGATGNN| 206, 619, 692
BstUI CG|CG 187, 1076
BstYI Pu|GATCPy 6, 51, 730, 1193
BtrI CAC|GTC 286, 517
Cac8I GCN|NGC 199
Cfr10I [AG]|CCGG[TC] 199
DdeI C|TNAG 88, 313, 612, 877, 887, 1327
DpnI GA-CH3|TC 5, 50, 608, 718, 729, 929, 997, 1079, 1142, 1192, 1265, 1361, 1403, 1531
DpnII |GATC 5, 50, 608, 718, 729, 929, 997, 1079, 1142, 1192, 1265, 1361, 1403, 1531
EaeI Py|GGCCPu 1230
EcoRV GAT|ATC 420
Fnu4HI GC|NGC 1215, 1348, 1376
HaeIII GG|CC 1229, 1338
HhaI GCG|C 186
HinP1I G|CGC 186
HincII GTPy|PuAC 126, 1063
HindIII A|AGCTT 35, 748, 1499
HinfI G|ANTC 14, 101, 119, 193, 483, 638, 873, 905, 917, 1490
HpaI GTT|AAC 1063
HpaII C|CGG 198, 259, 1364
Hpy188I TCN|GA 147, 156, 298, 314, 342, 423, 492, 538, 611, 849, 876, 888, 908, 920, 1224, 1401, 1467, 1534
Hpy99I CG[AT]CG| 242, 266, 389, 454
HpyCH4III ACN|GT 320, 366, 1020
HpyCH4IV A|CGT 171, 285, 301, 516, 923, 942, 1407
HpyCH4V TG|CA 511, 568, 973, 1374, 1506
MboI |GATC 5, 50, 608, 718, 729, 929, 997, 1079, 1142, 1192, 1265, 1361, 1403, 1531
MscI TGG|CCA 1230
MseI T|TAA 323, 557, 744, 933, 1062, 1410, 1442
MslI CAPyNN|NNPuTG 110
MspA1I C[AC]G|C[GT]G 781
MspI C|CGG 198, 259, 1364
MwoI GCNNNNN|NNGC 195, 981, 1278, 1382
N.BstNBI GAGTCNNNN|N 488
NaeI GCC|GGC 199
NciI CC|[CG]GG 1365
NgoMIV G|CCGGC 199
NlaIII CATG| 274, 623, 954
NlaIV GGN|NCC 6
PvuII CAG|CTG 781
SacI GAGCT|C 1316, 1471
Sau3AI |GATC 5, 50, 608, 718, 729, 929, 997, 1079, 1142, 1192, 1265, 1361, 1403, 1531
Sau96I G|GNCC 1173, 1338
ScrFI CC|NGG 1365
SfcI C|TPuPyAG 738, 778
SgrAI CPu|CCGGPyG 200
SmlI C|TPyPuAG 1189, 1319, 1474
StyI C|C[AT][AT]GG 1202
Taqƒ¿I T|CGA 416, 455, 1165, 1305
TfiI G|A[AT]TC 14, 101, 119, 193, 873, 905, 917, 1490
TseI G|C[AT]GC 1215, 1348, 1376
Tsp45I |GT[CG]AC 519
Tsp509I |AATT 177, 413, 448, 564, 853, 881, 960, 1183, 1513
TspRI NNCA[CG]TGNN| 12, 367, 1278
XbaI T|CTAGA 1494
XmnI GAANN|NNTTC 106, 214, 819, 846


Click here to view TAIR data

>AT4G31630.1 length:1539
ATGGCGGATC CACTGATTCC CTCCCCAACC AACAAAGCTT TCTTCATCAT 
50
AGATCTATCT GGACAAAAAT CCAATCCTAT CATTCCTACT GAGTTCATTT 
100
GGAATCACTT CAATGGTAAG ATTCAGTCAA CGAATATGAA ACTAACTTCT 
150
GACGCTTCGG ACAGAAACTG GGACGTGAAA TTGGACGGCG CGAGATTCGC 
200
CGGCGGATGG AAAGATTTCT CCGTCTCCCA CTCTGTTAGA GACGACGACC 
250
TTTTGAGTTT CCGGCACGAC GGAGGCATGG TCTTCCACGT CTCACCCTTC 
300
GGACGTAGTT TCTCTCAGAT ACAGTTAATC TCTTCTTCTA CCTCTGACGA 
350
TGATGATGAT GAACGCACTG TTTTTGATGA TGATGAAGAC GACGATGTAG 
400
GAGATGATGA TGACAATTCG ATATCCGAAG ATGATTTTTG TTCAAAGAAA 
450
ATTTCGTCGA AGAAGAGAGC AAGAAAAGAA ACAGAGTCTT CATCAGACAA 
500
ATCTTATCTT GTTGCACACG TCACACCTTC AAGCCTACTC CGAGATAATA 
550
TGTGTGTTTT AAGCAAATTT GCAAGGTCAA ATGGTCTGGA CAGGAGAGAG 
600
TGTGAGATTG ATCTGAGGGA TGAACATGAA AAATCTTGGA CTCTGCTTTT 
650
GAGACACAAC AAAAAAACTG GTCAGGCTTT TATGCGTGGA GGATGGAGAA 
700
GTTTTTGTCG TAATAACGGG ATCAAAGCTG GATCTATCTG TAGGTTTAAG 
750
CTTGTCCAAA GCGGAATAAA ACCTGTGCTA CAGCTGTGTC CCAACGCCTC 
800
TAGCATTCCA GAAGGAAACT CTTCCAAAGC AAGAAAAAAA CGAAATGTTT 
850
CTGAAATTGA AGGTGATGAG ATAGAATCTG AGAATTGCTC AGAGACTATT 
900
CCATTGAATC AGAACAAGAT TCTGACGTTT GATCTTAAAC CTTACGTGTT 
950
CAGGTCATGT CAATTTTTTC TTCCTGCATC GTTCGCAAGA GAGAACGGGA 
1000
TCGTGGAAGC AGGAGAGGTA ACTGTATTGA ACAAAGATGG CATAGAGTGG 
1050
AAGTCGCATC TAGTTAACAT CAAGGGACGC GATCAGTTTT ACAATAGAGG 
1100
TTGTCAAGAT TTCTTTGTAG CTAATGGCGT AAAGAATGTT GGTGATCCCT 
1150
TCACATTGGA GGTTATTCGA GGAGGACCAT CTCCAATTCT CAAGATCTGT 
1200
TCCAAGGTGA AACAAGCAGC ATCATCTGAT GGCCATAAGA CTGCGGATAG 
1250
GAAACCCCGA ATGACGGATC AAGCACCACT GGCTGAAGAA CAAACTGATA 
1300
ATCGGGTCGA AAAGAGAGCT CAAGTTACTG AGGAAGGAGG GCCATCTCGC 
1350
AGCACTAGGG CTGATCCGGG AAACTTGCAG CAAAAGCAAC CTTGCTCAAT 
1400
ATCTGATCAC GTTAAAAAGG TGAAACAGAG TATTGTGGAT ACTTTAACCG 
1450
ATGTAAGGCG GTTTCAGTCG GAGCTCAAGG TAAAAGAACA GAATCTAGAA 
1500
GCTTCATTGC AAGAAATTGA TGCGTTAGGT ATGATCTGA
1550

>AT4G31630.1 longest ORF length:512
MADPLIPSPT NKAFFIIDLS GQKSNPIIPT EFIWNHFNGK IQSTNMKLTS 
50
DASDRNWDVK LDGARFAGGW KDFSVSHSVR DDDLLSFRHD GGMVFHVSPF 
100
GRSFSQIQLI SSSTSDDDDD ERTVFDDDED DDVGDDDDNS ISEDDFCSKK 
150
ISSKKRARKE TESSSDKSYL VAHVTPSSLL RDNMCVLSKF ARSNGLDRRE 
200
CEIDLRDEHE KSWTLLLRHN KKTGQAFMRG GWRSFCRNNG IKAGSICRFK 
250
LVQSGIKPVL QLCPNASSIP EGNSSKARKK RNVSEIEGDE IESENCSETI 
300
PLNQNKILTF DLKPYVFRSC QFFLPASFAR ENGIVEAGEV TVLNKDGIEW 
350
KSHLVNIKGR DQFYNRGCQD FFVANGVKNV GDPFTLEVIR GGPSPILKIC 
400
SKVKQAASSD GHKTADRKPR MTDQAPLAEE QTDNRVEKRA QVTEEGGPSR 
450
STRADPGNLQ QKQPCSISDH VKKVKQSIVD TLTDVRRFQS ELKVKEQNLE 
500
ASLQEIDALG MI
550