fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G32010 HSL1, HSI2-L1, VAL2 VP1/ABI3-LIKE 2, HSI2-like 1 (.1)

>AT4G32010.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 1650
PstI CTGCA|G 1905, 2180
PvuII CAG|CTG 640, 1594
SacI GAGCT|C 2321
SalI G|TCGAC 896
SmaI CCC|GGG 2139
StyI C|C[AT][AT]GG 161, 778
XbaI T|CTAGA 226, 246


Click here to view TAIR data

>AT4G32010.1 length:2343
ATGGAGTCAA TAAAGGTTTG CATGAACGCA CTGTGCGGAG CGGCCTCTAC 
50
GTCGGGCGAG TGGAAAAAAG GCTGGCCTAT GCGATCCGGT GATTTAGCTT 
100
CTCTCTGCGA TAAGTGTGGG TGTGCATACG AGCAATCCAT ATTCTGTGAA 
150
GTGTTCCATG CCAAGGAATC TGGTTGGAGA GAGTGTAATT CATGTGACAA 
200
GCGTCTTCAC TGTGGATGCA TTGCTTCTAG ATTTATGATG GAGCTTCTAG 
250
AGAATGGTGG TGTTACCTGT ATAAGTTGCG CCAAGAAATC CGGACTAATT 
300
TCTATGAATG TGAGCCATGA ATCTAACGGT AAGGACTTCC CCTCATTTGC 
350
TTCAGCAGAG CATGTAGGCA GTGTTCTTGA GAGGACAAAT CTCAAGCACT 
400
TGCTTCACTT TCAAAGAATC GACCCCACTC ATTCTTCTCT TCAAATGAAA 
450
CAAGAAGAAT CGCTGCTTCC TTCCAGCCTA GATGCTCTTA GACACAAAAC 
500
TGAAAGGAAA GAATTGTCTG CACAGCCAAA CTTGAGCATT TCACTTGGAC 
550
CTACGCTTAT GACAAGCCCA TTTCATGATG CTGCTGTTGA TGACAGAAGT 
600
AAGACTAATT CGATTTTCCA ACTGGCCCCT CGGTCCAGGC AGCTGCTTCC 
650
AAAACCTGCA AATTCAGCTC CCATTGCTGC TGGCATGGAG CCTAGTGGGA 
700
GCCTGGTGTC ACAGATTCAT GTCGCTCGGC CTCCTCCAGA AGGTCGCGGG 
750
AAGACCCAAT TGCTTCCCCG TTACTGGCCT AGGATTACTG ACCAAGAGCT 
800
GCTGCAATTA TCTGGACAGT ATCCTCATCT CTCAAATTCC AAAATTATAC 
850
CACTCTTTGA AAAAGTTCTG AGTGCGAGCG ATGCGGGTCG TATTGGTCGA 
900
CTGGTTCTTC CGAAAGCATG TGCAGAGGCA TATTTCCCCC CTATATCTCT 
950
ACCCGAGGGT CTCCCGTTAA AGATACAAGA CATAAAAGGG AAAGAATGGG 
1000
TGTTCCAGTT CAGGTTTTGG CCTAATAATA ACAGCAGGAT GTACGTTTTG 
1050
GAGGGTGTGA CTCCTTGCAT ACAGTCCATG CAGTTGCAAG CTGGTGACAC 
1100
TGTAACATTC AGCCGTACAG AACCTGAAGG AAAACTCGTA ATGGGATACC 
1150
GTAAAGCGAC GAACTCTACA GCGACACAGA TGTTCAAGGG AAGCAGTGAA 
1200
CCCAATCTGA ACATGTTTTC CAACAGCTTG AATCCGGGAT GTGGTGACAT 
1250
CAATTGGTCT AAACTAGAGA AGTCTGAGGA CATGGCAAAG GATAACTTAT 
1300
TTCTTCAGTC GTCCTTAACT TCTGCTAGGA AACGGGTTCG GAACATTGGG 
1350
ACTAAGAGCA AGCGTCTGCT CATTGATAGC GTAGATGTTC TGGAACTGAA 
1400
AATAACTTGG GAGGAGGCAC AGGAGCTGTT GCGGCCTCCC CAATCCACCA 
1450
AACCCAGCAT CTTTACGCTG GAAAATCAAG ATTTTGAAGA ATATGACGAA 
1500
CCACCAGTTT TCGGGAAGAG GACCCTTTTT GTCTCACGTC AAACAGGGGA 
1550
ACAAGAGCAA TGGGTGCAGT GTGATGCTTG TGGGAAATGG CGACAGCTGC 
1600
CGGTGGATAT TCTTCTTCCA CCAAAGTGGT CGTGCTCTGA TAATCTCTTG 
1650
GATCCTGGCA GGTCTTCATG TTCCGCACCT GATGAACTCT CTCCAAGAGA 
1700
ACAGGATACA CTTGTCCGGC AGAGCAAAGA GTTCAAAAGG AGGAGACTGG 
1750
CATCATCAAA CGAAAAGCTA AACCAGTCGC AGGATGCATC TGCTCTGAAT 
1800
AGTTTAGGAA ATGCAGGCAT CACCACAACC GGTGAACAGG GGGAAATCAC 
1850
GGTTGCAGCC ACGACCAAGC ATCCAAGACA CCGGGCAGGG TGTTCGTGCA 
1900
TCGTCTGCAG CCAACCACCG AGCGGAAAAG GCAAACACAA GCCGTCATGC 
1950
ACTTGCACTG TGTGCGAGGC AGTGAAGAGA CGATTCAGGA CGCTCATGCT 
2000
GCGGAAGCGG AACAAAGGAG AGGCAGGACA GGCAAGCCAG CAGGCGCAGT 
2050
CACAGTCAGA GTGCAGGGAC GAGACAGAAG TGGAGAGCAT TCCAGCGGTT 
2100
GAACTAGCCG CAGGGGAAAA CATCGACTTG AACTCAGACC CGGGGGCTTC 
2150
CCGAGTAAGC ATGATGAGGC TTCTCCAAGC TGCAGCGTTT CCTCTGGAAG 
2200
CATATCTGAA ACAAAAGGCT ATTTCCAATA CAGCAGGAGA ACAGCAAAGC 
2250
AGTGATATGG TCAGCACAGA ACACGGTTCG TCCTCAGCCG CACAAGAAAC 
2300
TGAGAAAGAC ACAACAAATG GAGCTCATGA TCCTGTGAAC TAA
2350

>AT4G32010.1 longest ORF length:780
MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE 
50
VFHAKESGWR ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI 
100
SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK 
150
QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS 
200
KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG 
250
KTQLLPRYWP RITDQELLQL SGQYPHLSNS KIIPLFEKVL SASDAGRIGR 
300
LVLPKACAEA YFPPISLPEG LPLKIQDIKG KEWVFQFRFW PNNNSRMYVL 
350
EGVTPCIQSM QLQAGDTVTF SRTEPEGKLV MGYRKATNST ATQMFKGSSE 
400
PNLNMFSNSL NPGCGDINWS KLEKSEDMAK DNLFLQSSLT SARKRVRNIG 
450
TKSKRLLIDS VDVLELKITW EEAQELLRPP QSTKPSIFTL ENQDFEEYDE 
500
PPVFGKRTLF VSRQTGEQEQ WVQCDACGKW RQLPVDILLP PKWSCSDNLL 
550
DPGRSSCSAP DELSPREQDT LVRQSKEFKR RRLASSNEKL NQSQDASALN 
600
SLGNAGITTT GEQGEITVAA TTKHPRHRAG CSCIVCSQPP SGKGKHKPSC 
650
TCTVCEAVKR RFRTLMLRKR NKGEAGQASQ QAQSQSECRD ETEVESIPAV 
700
ELAAGENIDL NSDPGASRVS MMRLLQAAAF PLEAYLKQKA ISNTAGEQQS 
750
SDMVSTEHGS SSAAQETEKD TTNGAHDPVN 
800