Locus |
Common name |
Short description |
AT4G32280 |
IAA29 |
indole-3-acetic acid inducible 29 (.1) |
>AT4G32280.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BfaI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DdeI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HpaII, HphI, I-CeuI, I-SceI, KasI, MboII, MfeI, MluI, MlyI, MnlI, MspA1I, MspI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
Acc65I
| G|GTACC |
109 |
AflIII
| A|CPuPyGT |
307 |
AluI
| AG|CT |
531 |
BalI
| TGG|CCA |
201, 292 |
BanI
| G|GPyPuCC |
109 |
BclI
| T|GATCA |
569 |
BglII
| A|GATCT |
680 |
BsaBI
| GATNN|NNATC |
444 |
BsaJI
| C|CNNGG |
633 |
BsiEI
| CGPuPy|CG |
83, 724 |
BslI
| CCNNNNN|NNGG |
49, 634 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
109 |
BsrI
| ACTGGN| |
650 |
BstF5I
| GGATGNN| |
290, 499, 667 |
BstYI
| Pu|GATCPy |
9, 225, 680 |
Cac8I
| GCN|NGC |
203 |
DpnI
| GA-CH3|TC |
8, 82, 224, 388, 438, 468, 568, 679, 719 |
DpnII
| |GATC |
8, 82, 224, 388, 438, 468, 568, 679, 719 |
EaeI
| Py|GGCCPu |
201, 292 |
EcoRV
| GAT|ATC |
526, 705 |
Fnu4HI
| GC|NGC |
93 |
HaeIII
| GG|CC |
200, 291 |
HindIII
| A|AGCTT |
532 |
HinfI
| G|ANTC |
234, 240, 549, 690 |
Hpy188I
| TCN|GA |
237, 701 |
Hpy99I
| CG[AT]CG| |
133 |
HpyCH4III
| ACN|GT |
432, 725 |
HpyCH4IV
| A|CGT |
134 |
HpyCH4V
| TG|CA |
730 |
KpnI
| GGTAC|C |
109 |
MboI
| |GATC |
8, 82, 224, 388, 438, 468, 568, 679, 719 |
MscI
| TGG|CCA |
201, 292 |
MseI
| T|TAA |
54, 483, 489, 537, 751 |
MslI
| CAPyNN|NNPuTG |
377, 397 |
MwoI
| GCNNNNN|NNGC |
179 |
N.BstNBI
| GAGTCNNNN|N |
245, 554 |
NlaIII
| CATG| |
306, 672 |
NlaIV
| GGN|NCC |
109 |
NspI
| PuCATG|Py |
307 |
PciI
| A|CATGT |
307 |
PvuI
| CGAT|CG |
83 |
RsaI
| GT|AC |
108 |
Sau3AI
| |GATC |
8, 82, 224, 388, 438, 468, 568, 679, 719 |
StyI
| C|C[AT][AT]GG |
633 |
Taqƒ¿I
| T|CGA |
84, 658, 721 |
TfiI
| G|A[AT]TC |
234, 690 |
TseI
| G|C[AT]GC |
93 |
Tsp45I
| |GT[CG]AC |
646 |
Tsp509I
| |AATT |
161, 614, 712 |
XmnI
| GAANN|NNTTC |
695 |
Click here to view TAIR data
>AT4G32280.1 length:756
ATGGAGTTGG ATCTTGGTCT ATCTCTTTCA CCTCATAAAT CTTCCAAGTT | 50 |
AGGGTTTAAC TTTGACCTCA ACAAGCATTG TGCGATCGAG GGTGCTGCGT | 100 |
CTTGTTTGGG TACCGAAAAA CTGCGTTTTG AGGCGACGTT TGGGTTAGGG | 150 |
AATGTGGAGG AAAATTGTTA TATGCCAAAA CAGCGTTTGT TTGCCTTGAA | 200 |
TGGCCAGCCC AACGAGGAAG ACGAAGATCC TCTGGAATCC GAGTCTTCAA | 250 |
TAGTTTACGA TGATGAGGAG GAAAATAGCG AAGTTGTTGG ATGGCCACCA | 300 |
GTAAAAACAT GTATGATAAA GTATGGTAGT TATCATCATC GTCATATTCG | 350 |
TAATCACCAT CATTGCCCGT ATCATCATCG TGGTAGGAGG ATCACGGCGA | 400 |
TGAACAACAA CATATCTAAT CCAACAACGG CTACTGTGGG ATCATCATCT | 450 |
TCTTCGTCAA TATCATCAAG ATCATCAATG TATGTTAAGG TTAAGATGGA | 500 |
TGGTGTGGCA ATAGCAAGAA AAGTGGATAT CAAGCTTTTT AACTCTTACG | 550 |
AGTCCCTCAC TAACTCCTTG ATCACTATGT TTACCGAATA TGAAGATTGC | 600 |
GACAGAGAAG ATACAAATTA TACATTCACC TTCCAAGGGA AAGAGGGTGA | 650 |
CTGGCTACTT CGAGGGGATG TTACATGGAA GATCTTTGCG GAATCTGTTC | 700 |
ATCGGATATC AATAATTAGA GATCGACCGT GTGCATATAC AAGATGTTTG | 750 |
TTTTAA | 800 |
>AT4G32280.1 longest ORF length:251
MELDLGLSLS PHKSSKLGFN FDLNKHCAIE GAASCLGTEK LRFEATFGLG | 50 |
NVEENCYMPK QRLFALNGQP NEEDEDPLES ESSIVYDDEE ENSEVVGWPP | 100 |
VKTCMIKYGS YHHRHIRNHH HCPYHHRGRR ITAMNNNISN PTTATVGSSS | 150 |
SSSISSRSSM YVKVKMDGVA IARKVDIKLF NSYESLTNSL ITMFTEYEDC | 200 |
DREDTNYTFT FQGKEGDWLL RGDVTWKIFA ESVHRISIIR DRPCAYTRCL | 250 |
F | 300 |
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