fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G32280 IAA29 indole-3-acetic acid inducible 29 (.1)

>AT4G32280.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 680
EcoRV GAT|ATC 526, 705
HindIII A|AGCTT 532
KpnI GGTAC|C 109
StyI C|C[AT][AT]GG 633


Click here to view TAIR data

>AT4G32280.1 length:756
ATGGAGTTGG ATCTTGGTCT ATCTCTTTCA CCTCATAAAT CTTCCAAGTT 
50
AGGGTTTAAC TTTGACCTCA ACAAGCATTG TGCGATCGAG GGTGCTGCGT 
100
CTTGTTTGGG TACCGAAAAA CTGCGTTTTG AGGCGACGTT TGGGTTAGGG 
150
AATGTGGAGG AAAATTGTTA TATGCCAAAA CAGCGTTTGT TTGCCTTGAA 
200
TGGCCAGCCC AACGAGGAAG ACGAAGATCC TCTGGAATCC GAGTCTTCAA 
250
TAGTTTACGA TGATGAGGAG GAAAATAGCG AAGTTGTTGG ATGGCCACCA 
300
GTAAAAACAT GTATGATAAA GTATGGTAGT TATCATCATC GTCATATTCG 
350
TAATCACCAT CATTGCCCGT ATCATCATCG TGGTAGGAGG ATCACGGCGA 
400
TGAACAACAA CATATCTAAT CCAACAACGG CTACTGTGGG ATCATCATCT 
450
TCTTCGTCAA TATCATCAAG ATCATCAATG TATGTTAAGG TTAAGATGGA 
500
TGGTGTGGCA ATAGCAAGAA AAGTGGATAT CAAGCTTTTT AACTCTTACG 
550
AGTCCCTCAC TAACTCCTTG ATCACTATGT TTACCGAATA TGAAGATTGC 
600
GACAGAGAAG ATACAAATTA TACATTCACC TTCCAAGGGA AAGAGGGTGA 
650
CTGGCTACTT CGAGGGGATG TTACATGGAA GATCTTTGCG GAATCTGTTC 
700
ATCGGATATC AATAATTAGA GATCGACCGT GTGCATATAC AAGATGTTTG 
750
TTTTAA
800

>AT4G32280.1 longest ORF length:251
MELDLGLSLS PHKSSKLGFN FDLNKHCAIE GAASCLGTEK LRFEATFGLG 
50
NVEENCYMPK QRLFALNGQP NEEDEDPLES ESSIVYDDEE ENSEVVGWPP 
100
VKTCMIKYGS YHHRHIRNHH HCPYHHRGRR ITAMNNNISN PTTATVGSSS 
150
SSSISSRSSM YVKVKMDGVA IARKVDIKLF NSYESLTNSL ITMFTEYEDC 
200
DREDTNYTFT FQGKEGDWLL RGDVTWKIFA ESVHRISIIR DRPCAYTRCL 
250
F
300