fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G32730 ATMYB3R-1, PC-MYB1, ATMYB3R1 C-MYB-LIKE TRANSCRIPTION FACTOR 3R-1, ARABIDOOSIS THALIANA MYB DOMAIN PROTEIN 3R1, Homeodomain-like protein (.1.2)

>AT4G32730.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 725, 1996
NcoI C|CATGG 1536
PstI CTGCA|G 1292
PvuII CAG|CTG 1749
SacI GAGCT|C 1697
StyI C|C[AT][AT]GG 45, 1536, 1592, 2021
XbaI T|CTAGA 1029, 1639


Click here to view TAIR data

>AT4G32730.1 length:2331
ATGAAGCGTG AGATGAAAGC ACCTACTACT CCACTAGAGA GTCTCCAAGG 
50
TGACCTCAAA GGAAAACAAG GGAGGACATC TGGCCCTGCT AGACGATCTA 
100
CCAAAGGACA ATGGACACCT GAAGAGGACG AAGTCTTGTG TAAAGCTGTT 
150
GAGCGTTTTC AAGGAAAGAA CTGGAAGAAG ATAGCTGAAT GTTTTAAGGA 
200
TCGGACTGAT GTTCAGTGTC TTCATAGATG GCAAAAGGTC TTGAACCCAG 
250
AGCTTGTGAA AGGACCGTGG TCAAAAGAGG AGGATAACAC AATAATTGAC 
300
CTGGTTGAAA AATATGGGCC AAAGAAATGG TCTACTATAT CTCAGCATTT 
350
ACCTGGGCGC ATAGGAAAGC AATGTAGGGA AAGGTGGCAT AACCATCTTA 
400
ACCCTGGGAT TAATAAAAAT GCATGGACTC AGGAAGAGGA ACTGACTCTT 
450
ATTCGTGCGC ATCAAATTTA TGGGAATAAA TGGGCAGAGC TTATGAAATT 
500
TTTGCCAGGA AGGTCAGATA ATTCGATAAA AAATCATTGG AACAGCTCAG 
550
TTAAGAAGAA GTTGGATTCC TACTATGCAT CAGGTCTTTT AGATCAGTGT 
600
CAAAGCTCGC CATTAATTGC CCTTCAGAAC AAATCTATCG CTTCATCTTC 
650
CTCGTGGATG CACAGCAATG GAGATGAAGG TAGTTCAAGG CCAGGGGTTG 
700
ATGCTGAGGA ATCAGAATGC AGCCAAGCTT CAACTGTTTT CTCACAATCA 
750
ACCAACGATT TACAAGATGA AGTTCAACGT GGAAATGAGG AATATTACAT 
800
GCCTGAATTT CATTCAGGAA CGGAGCAGCA AATCTCAAAC GCTGCATCTC 
850
ATGCAGAACC GTACTACCCT TCCTTTAAAG ATGTCAAAAT TGTTGTCCCC 
900
GAAATTTCTT GTGAAACAGA ATGTTCGAAG AAGTTTCAGA ATCTTAATTG 
950
TTCTCACGAG CTAAGAACTA CCACAGCTAC GGAGGATCAA TTGCCGGGTG 
1000
TATCTAATGA TGCTAAACAG GACCGTGGTC TAGAGTTATT GACCCATAAC 
1050
ATGGACAACG GTGGAAAAAA CCAAGCACTT CAACAAGATT TTCAAAGTTC 
1100
AGTAAGATTA AGTGATCAAC CTTTTTTGTC AAACTCGGAC ACAGATCCAG 
1150
AAGCTCAAAC TTTGATCACG GATGAGGAGT GTTGTAGGGT TCTTTTTCCA 
1200
GATAACATGA AAGATAGCAG TACATCTTCT GGTGAGCAAG GTCGGAATAT 
1250
GGTTGACCCT CAAAACGGCA AAGGATCTCT TTGTTCTCAG GCTGCAGAAA 
1300
CCCATGCTCA TGAAACTGGA AAAGTTCCAG CTTTACCGTG GCATCCTTCA 
1350
AGTTCTGAGG GCCTGGCGGG TCATAATTGT GTCCCTTTGT TGGATTCAGA 
1400
CTTGAAGGAC TCACTTTTAC CCCGTAATGA TTCCAACGCT CCTATACAAG 
1450
GTTGTCGCCT TTTTGGAGCT ACCGAATTAG AATGTAAGAC TGATACAAAT 
1500
GACGGTTTCA TCGATACTTA CGGACATGTA ACTTCCCATG GCAATGATGA 
1550
TAATGGTGGT TTCCCAGAAC AACAGGGGCT GTCATATATT CCCAAGGATT 
1600
CTTTGAAGCT AGTACCTTTG AATAGTTTTT CTTCTCCTTC TAGAGTGAAC 
1650
AAGATTTATT TTCCTATTGA CGATAAGCCG GCTGAAAAAG ACAAAGGAGC 
1700
TCTTTGTTAT GAACCTCCAC GTTTTCCAAG TGCAGATATT CCTTTCTTCA 
1750
GCTGTGATCT TGTACCATCA AATAGTGACT TACGGCAAGA GTACAGTCCC 
1800
TTTGGTATCC GTCAGTTGAT GATTTCTTCA ATGAATTGTA CAACTCCGTT 
1850
AAGGTTATGG GATTCACCGT GTCACGATAG GAGCCCTGAT GTCATGCTTA 
1900
ATGATACTGC CAAAAGTTTT AGTGGTGCAC CATCCATCTT AAAGAAGCGG 
1950
CATCGAGACT TGCTTTCACC TGTGCTTGAT AGAAGAAAAG ACAAAAAGCT 
2000
TAAAAGGGCT GCGACTTCCT CCTTGGCTAA TGATTTTTCG CGCTTAGATG 
2050
TAATGCTTGA TGAAGGAGAT GATTGCATGA CCTCTCGTCC GTCAGAGTCT 
2100
CCTGAAGATA AAAATATATG TGCCTCCCCT TCCATAGCCA GAGATAACAG 
2150
AAATTGTGCA TCAGCTCGGT TATATCAAGA AATGATTCCG ATAGATGAGG 
2200
AACCAAAGGA AACCTTAGAA TCAGGTGGAG TGACTTCTAT GCAAAATGAA 
2250
AATGGATGTA ATGACGGTGG TGCTTCAGCT AAAAATGTAA GTCCGTCTTT 
2300
GTCCTTGCAT ATTATCTGGT ATCAGTTATA A
2350

>AT4G32730.1 longest ORF length:776
MKREMKAPTT PLESLQGDLK GKQGRTSGPA RRSTKGQWTP EEDEVLCKAV 
50
ERFQGKNWKK IAECFKDRTD VQCLHRWQKV LNPELVKGPW SKEEDNTIID 
100
LVEKYGPKKW STISQHLPGR IGKQCRERWH NHLNPGINKN AWTQEEELTL 
150
IRAHQIYGNK WAELMKFLPG RSDNSIKNHW NSSVKKKLDS YYASGLLDQC 
200
QSSPLIALQN KSIASSSSWM HSNGDEGSSR PGVDAEESEC SQASTVFSQS 
250
TNDLQDEVQR GNEEYYMPEF HSGTEQQISN AASHAEPYYP SFKDVKIVVP 
300
EISCETECSK KFQNLNCSHE LRTTTATEDQ LPGVSNDAKQ DRGLELLTHN 
350
MDNGGKNQAL QQDFQSSVRL SDQPFLSNSD TDPEAQTLIT DEECCRVLFP 
400
DNMKDSSTSS GEQGRNMVDP QNGKGSLCSQ AAETHAHETG KVPALPWHPS 
450
SSEGLAGHNC VPLLDSDLKD SLLPRNDSNA PIQGCRLFGA TELECKTDTN 
500
DGFIDTYGHV TSHGNDDNGG FPEQQGLSYI PKDSLKLVPL NSFSSPSRVN 
550
KIYFPIDDKP AEKDKGALCY EPPRFPSADI PFFSCDLVPS NSDLRQEYSP 
600
FGIRQLMISS MNCTTPLRLW DSPCHDRSPD VMLNDTAKSF SGAPSILKKR 
650
HRDLLSPVLD RRKDKKLKRA ATSSLANDFS RLDVMLDEGD DCMTSRPSES 
700
PEDKNICASP SIARDNRNCA SARLYQEMIP IDEEPKETLE SGGVTSMQNE 
750
NGCNDGGASA KNVSPSLSLH IIWYQL
800