fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G32800 Integrase-type DNA-binding superfamily protein (.1)

>AT4G32800.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 226


Click here to view TAIR data

>AT4G32800.1 length:666
ATGGCGGATT CGTCTTCCGA CAAGGAGAAG AAGGAAAATA ATAAGCAGCC 
50
CGTGTATCGT GGAGTCCGTA TGAGGAGCTG GGGAAAATGG GTATCGGAGA 
100
TTCGCGAACC GAGGAAGAAA TCGAGAATCT GGCTCGGGAC TTTTCCGACG 
150
GCGGAGATGG CTATGCGTGC TCACGACGTG GCGGCTATGA GTATCAAAGG 
200
AACTTCAGCC ATTCTCAATT TCCCTGAGCT CTCTAAACTT CTTCCCCGAC 
250
CCGTTTCGCT CAGCCCTCGT GACGTCAGAG CTGCGGCGAC CAAAGCTGCT 
300
CTCATGGACT TCGATACGAC GGCGTTTCGT TCGGATACTG AGACTAGCGA 
350
AACGACGACG TCGAATAAAA TGTCAGAGAG TAGTGAGAGT AACGAAACGG 
400
TGTCGTTCTC ATCGTCGTCT TGGTCCTCTG TTACGAGCAT TGAGGAAAGT 
450
ACAGTCTCCG ACGATCTTGA CGAGATCGTA AAGTTACCGA GTCTAGGAAC 
500
GAGCCTAAAC GAGTCGAACG AGTTCGTGAT ATTTGACTCG TTGGAGGATT 
550
TGGTGTACAT GCCTCGGTGG TTAAGCGGTA CGGAAGAAGA AGTTTTTACG 
600
TATAATAACA ATGATTCTTC GTTGAATTAC TCATCAGTTT TCGAATCTTG 
650
GAAACATTTT CCCTGA
700

>AT4G32800.1 longest ORF length:221
MADSSSDKEK KENNKQPVYR GVRMRSWGKW VSEIREPRKK SRIWLGTFPT 
50
AEMAMRAHDV AAMSIKGTSA ILNFPELSKL LPRPVSLSPR DVRAAATKAA 
100
LMDFDTTAFR SDTETSETTT SNKMSESSES NETVSFSSSS WSSVTSIEES 
150
TVSDDLDEIV KLPSLGTSLN ESNEFVIFDS LEDLVYMPRW LSGTEEEVFT 
200
YNNNDSSLNY SSVFESWKHF P
250