fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G32890 GATA9 GATA transcription factor 9 (.1)

>AT4G32890.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PvuII, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 847
HindIII A|AGCTT 292
PacI TTAAT|TAA 354
PstI CTGCA|G 449
SacI GAGCT|C 19, 775
SalI G|TCGAC 58, 336
StyI C|C[AT][AT]GG 422


Click here to view TAIR data

>AT4G32890.1 length:927
ATGGAAAAGA TAGCTCCGGA GCTCTTCCTC GTCGCCGGTA ACCCGGACTC 
50
TTTCGTCGTC GACGACCTCC TCGACTTCTC TAACGACGAC GGCGAAGTTG 
100
ACGACGGCTT AAACACTCTT CCCGATTCTT CAACACTCTC CACCGGCACT 
150
CTCACCGACA GTTCCAACTC CTCCTCGCTT TTCACCGACG GCACTGGCTT 
200
CTCCGACCTA TATATTCCGA ATGACGATAT AGCAGAATTA GAATGGTTAT 
250
CAAATTTTGT GGAAGAATCA TTCGCAGGAG AAGACCAAGA CAAGCTTCAC 
300
TTATTTTCCG GTTTAAAAAA CCCTCAAACC ACCGGGTCGA CCCTGACCCA 
350
CTTAATTAAA CCCGAACCCG AACTTGATCA TCAATTCATC GACATCGATG 
400
AATCCAACGT CGCCGTTCCT GCCAAGGCCA GAAGCAAGAG ATCACGTTCT 
450
GCAGCCTCCA CGTGGGCTTC CCGTCTTTTA TCCTTAGCCG ATTCCGACGA 
500
AACCAATCCC AAGAAGAAAC AACGAAGAGT GAAAGAACAA GACTTCGCCG 
550
GAGATATGGA CGTGGATTGC GGAGAAAGCG GAGGAGGACG ACGTTGTTTG 
600
CACTGCGCGA CGGAGAAGAC GCCGCAATGG AGGACGGGAC CTATGGGTCC 
650
GAAGACGCTT TGTAACGCTT GCGGAGTGAG GTACAAATCA GGGAGGCTCG 
700
TGCCGGAGTA TAGACCGGCG TCGAGTCCGA CGTTCGTGAT GGCGAGGCAC 
750
TCGAACTCTC ACCGGAAAGT GATGGAGCTC CGGCGACAGA AGGAGATGAG 
800
AGACGAGCAT TTGCTGAGTC AGCTTAGGTG TGAGAATCTA CTGATGGATA 
850
TCAGATCCAA CGGTGAAGAT TTCTTAATGC ATAATAATAC TAACCACGTG 
900
GCTCCTGATT TTAGACACTT AATCTAG
950

>AT4G32890.1 longest ORF length:308
MEKIAPELFL VAGNPDSFVV DDLLDFSNDD GEVDDGLNTL PDSSTLSTGT 
50
LTDSSNSSSL FTDGTGFSDL YIPNDDIAEL EWLSNFVEES FAGEDQDKLH 
100
LFSGLKNPQT TGSTLTHLIK PEPELDHQFI DIDESNVAVP AKARSKRSRS 
150
AASTWASRLL SLADSDETNP KKKQRRVKEQ DFAGDMDVDC GESGGGRRCL 
200
HCATEKTPQW RTGPMGPKTL CNACGVRYKS GRLVPEYRPA SSPTFVMARH 
250
SNSHRKVMEL RRQKEMRDEH LLSQLRCENL LMDIRSNGED FLMHNNTNHV 
300
APDFRHLI
350