fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G33280 REM16 AP2/B3-like transcriptional factor family protein (.1)

>AT4G33280.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 306
PvuII CAG|CTG 608
SacI GAGCT|C 818
SpeI A|CTAGT 496
StyI C|C[AT][AT]GG 306


Click here to view TAIR data

>AT4G33280.1 length:1014
ATGGAAGAGA ATTGCGAGGA TTGCATGAAA TGGGAAGAAG AACTCTACTG 
50
GACTCATTTT CAAACTCTCC ATTTCACTCA GCTCCTCCTT CCTGGTTTCC 
100
ACAATCGCCT CGTCATACCT CGAAAGTTTT CAACACACTG CAAAAGGAAG 
150
CTGCCTCAGA TTGTGACTCT CAAAAGTCCA AGTGGCGTTA CATATAATGT 
200
GGGAGTAGAG GAAGATGATG AAAAGACAAT GGCTTTTCGT TTTGGGTGGG 
250
ACAAGTTTGT GAAAGATCAT TCGCTAGAGG AGAATGATCT ATTGGTCTTC 
300
AAGTTCCATG GAGTGTCTGA GTTTGAAGTG CTTGTTTTCG ATGGACAGAC 
350
TTTATGTGAG AAACCTACTT CTTATTTCGT CAGGAAATGT GGGCATGCAG 
400
AGAAGACTAA AGCATCTCAC ACCGGTTATG AGCAAGAAGA ACATATTAAC 
450
TCTGACATTG ATACAGCATC TGCCCAGCTT CCTGTTATAT CTCCAACTAG 
500
TACAGTACGA GTCAGTGAAG GGAAGTATCC CCTTAGCGGT TTTAAGAAGA 
550
TGCGAAGAGA ATTAAGTAAT GACAATCTCG ATCAAAAAGC TGACGTGGAG 
600
ATGATTTCAG CTGGAAGCAA TAAGAAAGCC TTATCTCTGG CCAAGAGAGC 
650
CATTTCGCCG GATGGTTTCT TGGTGTTCAT GAAACGCTCT CATGTGGTAT 
700
CAAAGTGTTT TCTGACAATC CCATACAAAT GGTGCGTGAA GAACATGCTT 
750
ATCACACGTC AAGAAGTGGT GATGCAGGTG GATCAAACGA AATGGGAGAT 
800
GAAGTTTAAC ATTTTCGGAG CTCGTGGTAG TGGTGGGATT TCAACCGGGT 
850
GGAAGAAATT TGTACAAGAC AACAACTTGC GCGAAGGTGA TGTCTGTGTG 
900
TTTGAGCCAG CCAATTCTGA AACAAAACCG CTTCATCTCA ATGTCTATAT 
950
ATTCCGTGGT GAAGAAACGG AAAGAACCAA CAATGTTGAC CCGGTTTACA 
1000
CAATAAGTGA ATAA
1050

>AT4G33280.1 longest ORF length:337
MEENCEDCMK WEEELYWTHF QTLHFTQLLL PGFHNRLVIP RKFSTHCKRK 
50
LPQIVTLKSP SGVTYNVGVE EDDEKTMAFR FGWDKFVKDH SLEENDLLVF 
100
KFHGVSEFEV LVFDGQTLCE KPTSYFVRKC GHAEKTKASH TGYEQEEHIN 
150
SDIDTASAQL PVISPTSTVR VSEGKYPLSG FKKMRRELSN DNLDQKADVE 
200
MISAGSNKKA LSLAKRAISP DGFLVFMKRS HVVSKCFLTI PYKWCVKNML 
250
ITRQEVVMQV DQTKWEMKFN IFGARGSGGI STGWKKFVQD NNLREGDVCV 
300
FEPANSETKP LHLNVYIFRG EETERTNNVD PVYTISE
350