fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G34000 AtABF3, ABF3, DPBF5 DC3 PROMOTER-BINDING FACTOR 5, abscisic acid responsive elements-binding factor 3 (.1.2.3)

>AT4G34000.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, KpnI, NdeI, NheI, NotI, PacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 485, 917
HindIII A|AGCTT 1181
HpaI GTT|AAC 105, 862
NcoI C|CATGG 1306
PstI CTGCA|G 200
PvuII CAG|CTG 1154
SacI GAGCT|C 178
SpeI A|CTAGT 67
StyI C|C[AT][AT]GG 1306
XbaI T|CTAGA 7


Click here to view TAIR data

>AT4G34000.2 length:1365
ATGGGGTCTA GATTAAACTT CAAGAGCTTT GTTGATGGTG TGAGTGAGCA 
50
GCAGCCAACG GTGGGGACTA GTCTTCCATT GACTAGGCAG AACTCTGTGT 
100
TCTCGTTAAC CTTTGATGAG TTTCAGAACT CATGGGGTGG TGGAATTGGG 
150
AAAGATTTTG GGTCTATGAA CATGGATGAG CTCTTGAAGA ACATTTGGAC 
200
TGCAGAGGAA AGTCATTCAA TGATGGGAAA CAATACCAGT TACACCAACA 
250
TCAGCAATGG TAATAGTGGA AACACTGTTA TTAACGGCGG TGGTAACAAC 
300
ATTGGTGGGT TAGCTGTTGG TGTGGGAGGA GAAAGTGGTG GTTTTTTCAC 
350
TGGTGGGAGT TTGCAGAGAC AAGGTTCACT TACCTTGCCT CGGACGATTA 
400
GTCAGAAAAG GGTTGATGAT GTCTGGAAGG AGCTGATGAA GGAGGATGAC 
450
ATTGGAAATG GTGTTGTTAA TGGTGGGACA AGCGGAATTC CGCAGAGGCA 
500
ACAAACGCTG GGAGAGATGA CTTTGGAGGA GTTTTTGGTC AGGGCTGGTG 
550
TGGTTAGGGA AGAACCTCAA CCGGTGGAGA GTGTAACTAA CTTCAATGGC 
600
GGATTCTATG GATTTGGCAG TAATGGAGGT CTTGGGACAG CTAGTAATGG 
650
GTTTGTTGCA AACCAACCTC AAGATTTGTC AGGAAATGGA GTAGCGGTGA 
700
GACAGGATCT GCTGACTGCT CAAACTCAGC CACTACAGAT GCAGCAGCCA 
750
CAGATGGTGC AGCAGCCACA GATGGTGCAG CAGCCGCAAC AACTGATACA 
800
GACGCAGGAG AGGCCTTTTC CCAAACAGAC CACTATAGCA TTTTCCAACA 
850
CTGTTGATGT GGTTAACCGT TCTCAACCTG CAACACAGTG CCAGGAAGTG 
900
AAGCCTTCAA TACTTGGAAT TCATAACCAT CCTATGAACA ACAATCTACT 
950
GCAAGCTGTC GATTTTAAAA CAGGAGTAAC GGTTGCAGCA GTATCTCCTG 
1000
GAAGCCAGAT GTCACCTGAT CTGACTCCAA AGAGCGCCCT GGATGCATCT 
1050
TTGTCCCCTG TTCCTTACAT GTTTGGGCGA GTGAGAAAAA CAGGTGCAGT 
1100
TCTGGAGAAA GTGATTGAGA GAAGGCAAAA AAGGATGATA AAGAATAGGG 
1150
AATCAGCTGC AAGATCCCGC GCTCGCAAGC AAGCTTATAC GATGGAACTG 
1200
GAAGCAGAAA TTGCGCAACT CAAAGAATTG AATGAAGAGT TGCAGAAGAA 
1250
ACAAGTTGAA ATCATGGAAA AGCAGAAAAA TCAGCTTCTG GAGCCTCTGC 
1300
GCCAGCCATG GGGAATGGGA TGCAAAAGGC AATGCTTGCG AAGGACATTG 
1350
ACGGGTCCCT GGTAG
1400

>AT4G34000.2 longest ORF length:454
MGSRLNFKSF VDGVSEQQPT VGTSLPLTRQ NSVFSLTFDE FQNSWGGGIG 
50
KDFGSMNMDE LLKNIWTAEE SHSMMGNNTS YTNISNGNSG NTVINGGGNN 
100
IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD 
150
IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG 
200
GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP 
250
QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV 
300
KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS 
350
LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL 
400
EAEIAQLKEL NEELQKKQVE IMEKQKNQLL EPLRQPWGMG CKRQCLRRTL 
450
TGPW
500