fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G34410 RRTF1 (Redox Responsive Transcription Factor1 ), ERF109 redox responsive transcription factor 1 (.1)

>AT4G34410.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 25
PvuII CAG|CTG 443
SacI GAGCT|C 35, 336
SpeI A|CTAGT 310
StyI C|C[AT][AT]GG 427, 553
XhoI C|TCGAG 515


Click here to view TAIR data

>AT4G34410.1 length:807
ATGCATTATC CTAACAACAG AACCGAATTC GTCGGAGCTC CAGCCCCAAC 
50
CCGGTATCAA AAGGAGCAGT TGTCACCGGA GCAAGAGCTT TCAGTTATTG 
100
TCTCTGCTTT GCAACACGTG ATCTCAGGGG AAAACGAAAC GGCGCCGTGT 
150
CAGGGTTTTT CCAGTGACAG CACAGTGATA AGCGCGGGAA TGCCTCGGTT 
200
GGATTCAGAC ACTTGTCAAG TCTGTAGGAT CGAAGGATGT CTCGGCTGTA 
250
ACTACTTTTT CGCGCCAAAT CAGAGAATTG AAAAGAATCA TCAACAAGAA 
300
GAAGAGATTA CTAGTAGTAG TAACAGAAGA AGAGAGAGCT CTCCCGTGGC 
350
GAAGAAAGCG GAAGGTGGCG GGAAAATCAG GAAGAGGAAG AACAAGAAGA 
400
ATGGTTACAG AGGAGTTAGG CAAAGACCTT GGGGAAAATT TGCAGCTGAG 
450
ATCAGAGATC CTAAAAGAGC CACACGTGTT TGGCTTGGTA CTTTCGAAAC 
500
CGCCGAAGAT GCGGCTCGAG CTTATGATCG AGCCGCGATT GGATTCCGTG 
550
GGCCAAGGGC TAAACTCAAC TTCCCCTTTG TGGATTACAC GTCTTCAGTT 
600
TCATCTCCTG TTGCTGCTGA TGATATAGGA GCAAAGGCAA GTGCAAGCGC 
650
CAGTGTGAGC GCCACAGATT CAGTTGAAGC AGAGCAATGG AACGGAGGAG 
700
GAGGGGATTG CAATATGGAG GAGTGGATGA ATATGATGAT GATGATGGAT 
750
TTTGGGAATG GAGATTCTTC AGATTCAGGA AATACAATTG CTGATATGTT 
800
CCAGTGA
850

>AT4G34410.1 longest ORF length:268
MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC 
50
QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE 
100
EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE 
150
IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV 
200
SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD 
250
FGNGDSSDSG NTIADMFQ
300