Locus |
Common name |
Short description |
AT4G34410 |
RRTF1 (Redox Responsive Transcription Factor1 ), ERF109 |
redox responsive transcription factor 1 (.1) |
>AT4G34410.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, XbaI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
25 |
PvuII
| CAG|CTG |
443 |
SacI
| GAGCT|C |
35, 336 |
SpeI
| A|CTAGT |
310 |
StyI
| C|C[AT][AT]GG |
427, 553 |
XhoI
| C|TCGAG |
515 |
Click here to view TAIR data
>AT4G34410.1 length:807
ATGCATTATC CTAACAACAG AACCGAATTC GTCGGAGCTC CAGCCCCAAC | 50 |
CCGGTATCAA AAGGAGCAGT TGTCACCGGA GCAAGAGCTT TCAGTTATTG | 100 |
TCTCTGCTTT GCAACACGTG ATCTCAGGGG AAAACGAAAC GGCGCCGTGT | 150 |
CAGGGTTTTT CCAGTGACAG CACAGTGATA AGCGCGGGAA TGCCTCGGTT | 200 |
GGATTCAGAC ACTTGTCAAG TCTGTAGGAT CGAAGGATGT CTCGGCTGTA | 250 |
ACTACTTTTT CGCGCCAAAT CAGAGAATTG AAAAGAATCA TCAACAAGAA | 300 |
GAAGAGATTA CTAGTAGTAG TAACAGAAGA AGAGAGAGCT CTCCCGTGGC | 350 |
GAAGAAAGCG GAAGGTGGCG GGAAAATCAG GAAGAGGAAG AACAAGAAGA | 400 |
ATGGTTACAG AGGAGTTAGG CAAAGACCTT GGGGAAAATT TGCAGCTGAG | 450 |
ATCAGAGATC CTAAAAGAGC CACACGTGTT TGGCTTGGTA CTTTCGAAAC | 500 |
CGCCGAAGAT GCGGCTCGAG CTTATGATCG AGCCGCGATT GGATTCCGTG | 550 |
GGCCAAGGGC TAAACTCAAC TTCCCCTTTG TGGATTACAC GTCTTCAGTT | 600 |
TCATCTCCTG TTGCTGCTGA TGATATAGGA GCAAAGGCAA GTGCAAGCGC | 650 |
CAGTGTGAGC GCCACAGATT CAGTTGAAGC AGAGCAATGG AACGGAGGAG | 700 |
GAGGGGATTG CAATATGGAG GAGTGGATGA ATATGATGAT GATGATGGAT | 750 |
TTTGGGAATG GAGATTCTTC AGATTCAGGA AATACAATTG CTGATATGTT | 800 |
CCAGTGA | 850 |
>AT4G34410.1 longest ORF length:268
MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC | 50 |
QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE | 100 |
EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE | 150 |
IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV | 200 |
SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD | 250 |
FGNGDSSDSG NTIADMFQ | 300 |
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