fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G34530 bHLH063, CIB1 cryptochrome-interacting basic-helix-loop-helix 1 (.1)

>AT4G34530.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 868
StyI C|C[AT][AT]GG 730


Click here to view TAIR data

>AT4G34530.1 length:1008
ATGAATGGAG CTATAGGAGG TGACCTTTTG CTCAATTTTC CTGACATGTC 
50
GGTCCTAGAG CGCCAAAGGG CTCACCTCAA GTACCTCAAT CCCACCTTTG 
100
ATTCTCCTCT CGCCGGCTTC TTTGCCGATT CTTCAATGAT TACCGGCGGC 
150
GAGATGGACA GCTATCTTTC GACTGCCGGT TTGAATCTTC CGATGATGTA 
200
CGGTGAGACG ACGGTGGAAG GTGATTCAAG ACTCTCAATT TCGCCGGAAA 
250
CGACGCTTGG GACTGGAAAT TTCAAGAAAC GGAAGTTTGA TACAGAGACT 
300
AAGGATTGTA ATGAGAAGAA GAAGAAGATG ACGATGAACA GAGATGACCT 
350
AGTAGAAGAA GGAGAAGAAG AGAAGTCGAA AATAACAGAG CAAAACAATG 
400
GGAGCACAAA AAGCATCAAG AAGATGAAAC ACAAAGCCAA GAAAGAAGAG 
450
AACAATTTCT CTAATGATTC ATCTAAAGTG ACGAAGGAAT TGGAGAAAAC 
500
GGATTATATT CATGTTCGTG CACGACGAGG CCAAGCCACT GATAGTCACA 
550
GCATAGCAGA ACGAGTTAGA AGAGAAAAGA TCAGTGAGAG AATGAAGTTT 
600
CTACAAGATT TGGTTCCTGG ATGCGACAAG ATCACAGGCA AAGCAGGGAT 
650
GCTTGATGAA ATCATTAACT ATGTTCAGTC TCTTCAGAGA CAAATCGAGT 
700
TCTTATCGAT GAAACTAGCA ATTGTGAATC CAAGGCCGGA TTTTGATATG 
750
GATGACATTT TTGCCAAAGA GGTTGCCTCA ACTCCAATGA CTGTGGTGCC 
800
ATCTCCTGAA ATGGTTCTTT CCGGTTATTC TCATGAGATG GTTCACTCTG 
850
GTTATTCTAG TGAGATGGTT AACTCCGGTT ACCTTCATGT CAATCCAATG 
900
CAGCAAGTGA ATACCAGTTC TGATCCATTG TCATGCTTCA ACAATGGCGA 
950
AGCTCCTTCG ATGTGGGACT CTCATGTGCA GAATCTCTAT GGCAATTTAG 
1000
GAGTTTGA
1050

>AT4G34530.1 longest ORF length:335
MNGAIGGDLL LNFPDMSVLE RQRAHLKYLN PTFDSPLAGF FADSSMITGG 
50
EMDSYLSTAG LNLPMMYGET TVEGDSRLSI SPETTLGTGN FKKRKFDTET 
100
KDCNEKKKKM TMNRDDLVEE GEEEKSKITE QNNGSTKSIK KMKHKAKKEE 
150
NNFSNDSSKV TKELEKTDYI HVRARRGQAT DSHSIAERVR REKISERMKF 
200
LQDLVPGCDK ITGKAGMLDE IINYVQSLQR QIEFLSMKLA IVNPRPDFDM 
250
DDIFAKEVAS TPMTVVPSPE MVLSGYSHEM VHSGYSSEMV NSGYLHVNPM 
300
QQVNTSSDPL SCFNNGEAPS MWDSHVQNLY GNLGV
350