fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G35390 AGF1 AT-hook protein of GA feedback 1 (.1)

>AT4G35390.1 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
ApaI GGGCC|C 731
BglII A|GATCT 100
PstI CTGCA|G 206
StyI C|C[AT][AT]GG 756


Click here to view TAIR data

>AT4G35390.1 length:900
ATGTCTAGTT ATATGCACCC TCTTCTAGGG CAAGAACTGC ATCTACAGAG 
50
ACCTGAAGAT TCCAGAACCC CACCTGATCA AAATAACATG GAACTTAACA 
100
GATCTGAAGC AGACGAAGCA AAGGCCGAGA CCACTCCCAC CGGTGGAGCC 
150
ACCAGCTCAG CCACAGCCTC TGGCTCTTCC TCCGGACGTC GTCCACGTGG 
200
TCGTCCTGCA GGTTCCAAAA ACAAACCCAA ACCTCCGACG ATTATAACTA 
250
GAGATAGTCC TAACGTCCTT AGATCACACG TTCTTGAAGT CACCTCCGGT 
300
TCGGACATAT CCGAGGCAGT CTCCACCTAC GCCACTCGTC GCGGCTGCGG 
350
CGTTTGCATT ATAAGCGGCA CGGGTGCGGT CACTAACGTC ACGATACGGC 
400
AACCTGCGGC TCCGGCTGGT GGAGGTGTGA TTACCCTGCA TGGTCGGTTT 
450
GACATTTTGT CTTTGACCGG TACTGCGCTT CCACCGCCTG CACCACCGGG 
500
AGCAGGAGGT TTGACGGTGT ATCTAGCCGG AGGTCAAGGA CAAGTTGTAG 
550
GAGGGAATGT GGCTGGTTCG TTAATTGCTT CGGGACCGGT AGTGTTGATG 
600
GCTGCTTCTT TTGCAAACGC AGTTTATGAT AGGTTACCGA TTGAAGAGGA 
650
AGAAACCCCA CCGCCGAGAA CCACCGGGGT GCAGCAGCAG CAGCCGGAGG 
700
CGTCTCAGTC GTCGGAGGTT ACGGGGAGTG GGGCCCAGGC GTGTGAGTCA 
750
AACCTCCAAG GTGGAAATGG TGGAGGAGGT GTTGCTTTCT ACAATCTTGG 
800
AATGAATATG AACAATTTTC AATTCTCCGG GGGAGATATT TACGGTATGA 
850
GCGGCGGTAG CGGAGGAGGT GGTGGCGGTG CGACTAGACC CGCGTTTTAG 
900

>AT4G35390.1 longest ORF length:299
MSSYMHPLLG QELHLQRPED SRTPPDQNNM ELNRSEADEA KAETTPTGGA 
50
TSSATASGSS SGRRPRGRPA GSKNKPKPPT IITRDSPNVL RSHVLEVTSG 
100
SDISEAVSTY ATRRGCGVCI ISGTGAVTNV TIRQPAAPAG GGVITLHGRF 
150
DILSLTGTAL PPPAPPGAGG LTVYLAGGQG QVVGGNVAGS LIASGPVVLM 
200
AASFANAVYD RLPIEEEETP PPRTTGVQQQ QPEASQSSEV TGSGAQACES 
250
NLQGGNGGGG VAFYNLGMNM NNFQFSGGDI YGMSGGSGGG GGGATRPAF
300