|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT4G35550 | HB-4, WOX13, ATWOX13 | WUSCHEL related homeobox 13 (.1) |
>AT4G35550.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BmrI, BpmI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HincII, HindIII, HpaI, HphI, HpyCH4III, I-CeuI, I-SceI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, SwaI, TliI, Tsp45I, Tsp509I, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AluI | AG|CT | 18, 283, 315, 393, 680 |
| AlwNI | CAGNNN|CTG | 325 |
| AvrII | C|CTAGG | 643 |
| BanI | G|GPyPuCC | 82, 160 |
| BanII | GPuGCPy|C | 669 |
| BclI | T|GATCA | 774 |
| BfaI | C|TAG | 285, 642, 698 |
| BglI | GCCNNNN|NGGC | 406 |
| BglII | A|GATCT | 213, 654 |
| BlpI | GC|TNAGC | 397 |
| BsaAI | PyAC|GTPu | 100 |
| BsaBI | GATNN|NNATC | 728 |
| BsaHI | GPu|CGPyC | 82 |
| BsaJI | C|CNNGG | 643, 718 |
| BsiHKAI | G[AT]GC[AT]|C | 455 |
| Bsp1286I | G[GAT]GC[CAT]|C | 455, 669 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 82, 160 |
| BsrI | ACTGGN| | 437, 750 |
| BstF5I | GGATGNN| | 724 |
| BstYI | Pu|GATCPy | 213, 654 |
| Cac8I | GCN|NGC | 365 |
| DdeI | C|TNAG | 135, 396, 514, 673, 683 |
| DpnI | GA-CH3|TC | 58, 212, 341, 373, 459, 653, 773 |
| DpnII | |GATC | 58, 212, 341, 373, 459, 653, 773 |
| EaeI | Py|GGCCPu | 408 |
| Fnu4HI | GC|NGC | 73, 473 |
| HaeII | PuGCGC|Py | 82 |
| HaeIII | GG|CC | 407, 561, 645 |
| HhaI | GCG|C | 81 |
| HinP1I | G|CGC | 81 |
| HinfI | G|ANTC | 299, 323, 510, 569 |
| HpaII | C|CGG | 78, 84 |
| Hpy188I | TCN|GA | 320, 513, 665, 684 |
| Hpy99I | CG[AT]CG| | 62, 450 |
| HpyCH4IV | A|CGT | 63, 99, 331, 451 |
| HpyCH4V | TG|CA | 186, 217, 244 |
| KasI | G|GCGCC | 82 |
| MboI | |GATC | 58, 212, 341, 373, 459, 653, 773 |
| MseI | T|TAA | 66 |
| MspI | C|CGG | 78, 84 |
| MwoI | GCNNNNN|NNGC | 79, 314, 406, 667, 799 |
| N.BstNBI | GAGTCNNNN|N | 515, 574 |
| NarI | GG|CGCC | 82 |
| NlaIII | CATG| | 476, 776, 793 |
| NlaIV | GGN|NCC | 76, 82, 160, 440 |
| NsiI | ATGCA|T | 187 |
| NspI | PuCATG|Py | 794 |
| RsaI | GT|AC | 97 |
| Sau3AI | |GATC | 58, 212, 341, 373, 459, 653, 773 |
| SfoI | GGC|GCC | 82 |
| StuI | AGG|CCT | 646 |
| StyI | C|C[AT][AT]GG | 643, 718 |
| Taqƒ¿I | T|CGA | 60, 339, 457 |
| TfiI | G|A[AT]TC | 323 |
| TseI | G|C[AT]GC | 473 |
| TspRI | NNCA[CG]TGNN| | 202 |
Click here to view TAIR data
>AT4G35550.1 length:807
ATGATGGAAT GGGATAATCA GCTACAACCC AATAACCATC ACTCTTCTAA | 50 |
TCTTCAAGGG ATCGACGTTA ATGGCGGCTC CGGCGCCGGA GGAGGAATGT | 100 |
ACGTGAAGGT GATGACCGAT GAGCAGTATG AAACTCTCAG GAAACAGATT | 150 |
GCTATTTACG GCACCATTTG TGAGCGTCTT GTTGAGATGC ATAAAACTCT | 200 |
CACTGCTCAA CAAGATCTTG CAGGAGGGAG AATGGGAGGA CTATATGCAG | 250 |
ACCCAATGAT GTCATCTTTA GGTCATAAGA TGACAGCTAG ACAGAGGTGG | 300 |
ACTCCTACGC CAGTCCAGCT TCAGATTCTG GAACGTATAT TCGATCAAGG | 350 |
CACGGGAACA CCGAGCAAGC AGAAGATCAA AGACATAACA GAAGAGCTGA | 400 |
GCCAACACGG CCAGATTGCT GAACAAAATG TCTATAACTG GTTCCAGAAC | 450 |
CGACGTGCTC GATCCAAGAG GAAGCAGCAT GGTGGAGGTT CTTCTGGAAA | 500 |
TAATAATGGT GAGTCTGAGG TAGAGACTGA AGTTGAAGCA TTGAATGAGA | 550 |
AGAGAGTAGT GAGGCCAGAG AGTCTTCTTG GTCTTCCAGA TGGAAATAGC | 600 |
AACAATAATG GGTTAGGGAC AACAACAGCA ACAACTACTG CTCCTAGGCC | 650 |
TGAAGATCTT TGCTTTCAGA GCCCTGAGAT TAGCTCAGAC CTTCACTTGC | 700 |
TAGATGTTCT ATCAAACCCA AGGGATGAGC ATCTTGTTGG AAAGATGGGA | 750 |
CTGGCGGAAA GTTACAACCT TTATGATCAT GTTGAAGATT ATGGCATGTC | 800 |
AGGCTGA | 850 |
>AT4G35550.1 longest ORF length:268
MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI | 50 |
AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW | 100 |
TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN | 150 |
RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS | 200 |
NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG | 250 |
LAESYNLYDH VEDYGMSG | 300 |