fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G35580 NTL9, CBNAC NAC transcription factor-like 9 (.1.2.3)

>AT4G35580.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 127
KpnI GGTAC|C 799
PstI CTGCA|G 940, 947, 1228, 1234, 1310
PvuII CAG|CTG 1231
SacI GAGCT|C 61, 359
StyI C|C[AT][AT]GG 151, 1213


Click here to view TAIR data

>AT4G35580.2 length:1605
ATGGGTGCTG TATCGATGGA GTCGCTTCCT TTAGGTTTCA GATTCAGACC 
50
TACCGATGAA GAGCTCGTCA ATCACTACCT CCGTCTCAAG ATCAACGGAC 
100
GTCACTCCGA TGTCCGTGTC ATCCCTGATA TCGATGTCTG CAAATGGGAA 
150
CCTTGGGATC TTCCTGCTCT CTCGGTGATT AAGACGGATG ATCCAGAGTG 
200
GTTCTTTTTC TGCCCTCGTG ATCGGAAATA CCCTAATGGT CATCGCTCTA 
250
ACAGAGCAAC TGACTCTGGC TATTGGAAAG CTACTGGTAA AGATCGTAGC 
300
ATCAAGTCTA AGAAGACTTT AATCGGTATG AAGAAGACTC TTGTCTTCTA 
350
TCGTGGACGA GCTCCTAAAG GTGAGCGGAC TAATTGGATT ATGCACGAGT 
400
ATCGTCCCAC TCTTAAGGAT CTTGATGGCA CTTCCCCTGG CCAAAGCCCT 
450
TACGTTCTTT GTCGCCTCTT CCACAAGCCT GATGATCGGG TTAATGGTGT 
500
CAAGTCCGAT GAAGCAGCTT TTACGGCCAG CAACAAATAC TCACCTGATG 
550
ATACATCATC TGATCTTGTT CAAGAAACAC CTTCCTCTGA TGCTGCTGTT 
600
GAGAAACCAT CAGATTATTC AGGTGGATGC GGTTATGCTC ATAGTAATAG 
650
TACCGCAGAT GGGACAATGA TTGAGGCACC TGAAGAGAAT CTTTGGTTAT 
700
CTTGTGACCT TGAAGATCAA AAGGCACCAC TACCGTGTAT GGATTCTATA 
750
TATGCTGGTG ATTTCAGTTA CGATGAGATT GGATTCCAAT TTCAAGATGG 
800
TACCAGCGAA CCAGATGTAT CACTAACAGA ATTGTTGGAG GAGGTGTTCA 
850
ATAACCCTGA TGACTTCTCT TGCGAGGAAT CGATCAGTCG AGAGAATCCA 
900
GCAGTCTCAC CAAATGGGAT ATTTTCATCT GCTAAAATGC TGCAGTCTGC 
950
AGCACCAGAG GATGCTTTCT TCAACGACTT CATGGCTTTC ACTGATACAG 
1000
ATGCTGAGAT GGCGCAATTG CAGTATGGTT CAGAAGGTGG AGCTTCTGGT 
1050
TGGCCAAGTG ACACTAATTC ATACTATAGT GATTTGGTTC AGCAAGAGCA 
1100
AATGATCAAT CATAACACAG AGAACAACCT CACAGAAGGG AGAGGGATAA 
1150
AGATCCGGGC TCGACAGCCT CAGAACCGGC AGAGTACAGG ATTGATAAAC 
1200
CAGGGTATTG CTCCAAGGAG AATCCGTCTG CAGCTGCAGT CTAACTCTGA 
1250
AGTAAAAGAA CGAGAGGAGG TGAATGAAGG ACACACTGTT ATTCCCGAGG 
1300
CCAAAGAAGC TGCAGCTAAA TACTCAGAGA AGAGTGGTTC TTTGGTTAAA 
1350
CCTCAAATAA AGCTCAGGGC GCGGGGAACT ATAGGCCAAG TAAAAGGAGA 
1400
GAGATTTGCA GACGACGAGA AGTTTGTTGT GGTTACAGGT ACAGGTGCAG 
1450
AGCAGAAAGA GACGAGGAGG GAAGCGATGG AAGGTGGTTG CAACGGTAAT 
1500
GGTGGCTGTG ATGGTTGGGG TAGGGATGGG TATATGGAGG ACACTGGTGA 
1550
GTTCATGACA CATGAGACAC AAAGAGAGAG AGAGAGAGAA TCAAATGTAG 
1600
TTTAA
1650

>AT4G35580.2 longest ORF length:534
MGAVSMESLP LGFRFRPTDE ELVNHYLRLK INGRHSDVRV IPDIDVCKWE 
50
PWDLPALSVI KTDDPEWFFF CPRDRKYPNG HRSNRATDSG YWKATGKDRS 
100
IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP 
150
YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV 
200
EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI 
250
YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP 
300
AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG 
350
WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN 
400
QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK 
450
PQIKLRARGT IGQVKGERFA DDEKFVVVTG TGAEQKETRR EAMEGGCNGN 
500
GGCDGWGRDG YMEDTGEFMT HETQRERERE SNVV
550