fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G35610 zinc finger (C2H2 type) family protein (.1)

>AT4G35610.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 559
EcoRV GAT|ATC 309
NdeI CA|TATG 466
SmaI CCC|GGG 550
StyI C|C[AT][AT]GG 304


Click here to view TAIR data

>AT4G35610.1 length:816
ATGAGTAATC CGAACCCAGA GAAAACGAAA GTGGATGTTA CTGAGGAAGA 
50
GAAAGAGGAA TCTGATGAGC AATGGAGCGA TGAAGAAACC AATATGAGAG 
100
AAATTGTTCT CGGCCTCCCT GCTTTGAATA TCAGCAGTAG AATATTTGGA 
150
GAGAGTAGTA GTGTCGTTGA GGAAGATGCA GAAAAAGCGC GTTTGAATGA 
200
GCAAGCGGTT CTTGCGGCGG GGTTGATTTT GGCTGCGGCA GAGGAAGCGG 
250
TTATGAAAGG AATGAATGAG GGAAGTGGGA GTGGTGGGAA GAAAAAGAGT 
300
AGACCAAGGA TATCTACGCA AACCGATGAC GAAGGGGATG GTTTGGGTGA 
350
AGGAGAAGCG AAAAAGCCGA AGAAGAAAGC AAAGGAATTG ACTCATCCAC 
400
CGAAAGGACC ACCGGTTTGT CATATCTGTG GAAGAGGTTT CGGTTCGTGG 
450
AAGGCAGTGT TTGGGCATAT GAGGGCTCAT AGAGATAGAA ACTATCAAGG 
500
GTTTCTTCCT CCTCCTACAT TCTCTGCGGG GGCTGAAAGG TTTGTGATTC 
550
CCGGGCTAAG ATCTGCTTTT ACTATTGCCA CTGTCGGAGG AGGAAGTTCT 
600
GGTGGTGTAG CGGTAGGAGG AAGAAGTTCC GGTGATTTTT CTGGCAGTGG 
650
TGGTGGTGAT GCGCCAGGAT CTGAAGGTGG GAGAGGTTCA GGTATTGATT 
700
TGAATGTGGA ACCTGTGGAG CAAGTAGAGG AAGCGACTGA ATCTGGATGT 
750
ATTGCCAAGT TCGATCTTAA TAAATCTCCA CCAAAAGATG AAGAGGAAGA 
800
GGACAAACCC AAGTGA
850

>AT4G35610.1 longest ORF length:271
MSNPNPEKTK VDVTEEEKEE SDEQWSDEET NMREIVLGLP ALNISSRIFG 
50
ESSSVVEEDA EKARLNEQAV LAAGLILAAA EEAVMKGMNE GSGSGGKKKS 
100
RPRISTQTDD EGDGLGEGEA KKPKKKAKEL THPPKGPPVC HICGRGFGSW 
150
KAVFGHMRAH RDRNYQGFLP PPTFSAGAER FVIPGLRSAF TIATVGGGSS 
200
GGVAVGGRSS GDFSGSGGGD APGSEGGRGS GIDLNVEPVE QVEEATESGC 
250
IAKFDLNKSP PKDEEEEDKP K
300