fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G35700 DAZ3 DUO1-activated zinc finger 3, zinc finger (C2H2 type) family protein (.1)

>AT4G35700.1 CDS map

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Uncut enzymes: AatII, AccI, AccIII(BspMII), AclI, AflII, AflIII, AhdI, AluI, AlwI, AlwNI, ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIII, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TfiI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name Recognition sequence Cut positions
Acc65I G|GTACC 241
AccII(FnuDII) CG|CG 175
AciI C|CGC 174, 198, 410, 521, 630
AfeI AGC|GCT 306
AgeI A|CCGGT 244, 577
Aor51HI(Eco47III) AGC|GCT 306
ApoI Pu|AATTPy 45, 763
AvaI C|PyCGPuG 10
AvaII G|G[AT]CC 778
BanI G|GPyPuCC 241
BfaI C|TAG 234, 506
BsaAI PyAC|GTPu 92
BsaJI C|CNNGG 176, 203
BsaWI [AT]|CCGG[AT] 244, 577
BslI CCNNNNN|NNGG 337, 792
BsoBI C|PyCGPuG 10
BspT107I(HgiCI) G|G[TC][AG]CC 241
BsrFI Pu|CCGGPy 244, 577
BstEII G|GTNACC 343
BstF5I GGATGNN| 148
BstUI CG|CG 175
BstYI Pu|GATCPy 751
BtgI C|CPuPyGG 176
Cac8I GCN|NGC 309
Cfr10I [AG]|CCGG[TC] 244, 577
DdeI C|TNAG 28, 120, 126, 394, 480, 541, 754
DpnI GA-CH3|TC 187, 494, 713, 750, 767
DpnII |GATC 187, 494, 713, 750, 767
EaeI Py|GGCCPu 311
EcoO109I PuG|GNCCPy 418, 779
Fnu4HI GC|NGC 177, 195, 410, 485, 537
HaeII PuGCGC|Py 306
HaeIII GG|CC 107, 310, 416
HhaI GCG|C 305
HinP1I G|CGC 305
HincII GTPy|PuAC 399
HinfI G|ANTC 134, 640
HpaII C|CGG 243, 576
Hpy188I TCN|GA 657, 685, 770
HpyCH4III ACN|GT 793
HpyCH4IV A|CGT 91, 249
HpyCH4V TG|CA 115, 583
KpnI GGTAC|C 241
MboI |GATC 187, 494, 713, 750, 767
MseI T|TAA 704
MspA1I C[AC]G|C[GT]G 176, 632
MspI C|CGG 243, 576
MwoI GCNNNNN|NNGC 174, 207, 630
N.BstNBI GAGTCNNNN|N 139
NlaIV GGN|NCC 241, 779
PpuMI PuG|G[AT]CCPy 779
RsaI GT|AC 240, 327
SacII CCGC|GG 176
Sau3AI |GATC 187, 494, 713, 750, 767
Sau96I G|GNCC 417, 778
StyI C|C[AT][AT]GG 203
Taqƒ¿I T|CGA 496, 720, 819
TseI G|C[AT]GC 195, 485, 537
Tsp45I |GT[CG]AC 247, 342
Tsp509I |AATT 22, 44, 97, 739, 762
TspRI NNCA[CG]TGNN| 595
XmnI GAANN|NNTTC 101


Click here to view TAIR data

>AT4G35700.1 length:828
ATGAGTAATC CCGAGAAGTC TAAAATTGCT GAGGAAGAGA ATGAGAATTT 
50
TGACGAGAGT GATTATCTTT GGAGCGATGA AGAAGGAGAC ATACGTGAAA 
100
TTGTTCTTGG CCTTCCTGCA CTAAGACTTA GTGAGAGTCT CAATGTGGAT 
150
GAAAGCATCC GTAACGAAGC CGTTTCCGCG GCGAAGTTGA TCGTGGCAGC 
200
CGCCAAGGAA GCCACAGGGA ATACAGAACA AAGTGCTAGT GGTACCGGTG 
250
ACGTTAGTGG AACTCCAGAA ATCATAAAAG TTGGGAAACC CCGTGTATTA 
300
TTGGAAGCGC TGGCCGAAGC ATCTGGTTGT ACCCCTATTG GGGTGACCAC 
350
TACTGAAGGA GAGGTAGTCA AGAAACCCCG TAAGAAAGGT TCTACTCAGT 
400
TGACACATCT GCCGCAAGGC CCTCCTATGT GTAATGTTTG TGGGAAGGGC 
450
TTTGCTTCTT GGAAGGCTGT TTTTGGACAT CTAAGGCAGC ATAAGGATCG 
500
AGGGTATCTA GGTTTTCTTC CTCCGCCAAC ATTCAATGCT GCTGAGGAAG 
550
GATTTGGTGG AGTTGCTACT GCTTCAACCG GTGGTGCAGT AGCCACTGCT 
600
ATTTCCGTTG GTGAAGTCCC TACTGCTTCT TCCGCTGGTG GACTCGCTAC 
650
GGCTTCTTCC GATGGTGAAG GGCTTGTTTC AAGTATCGGA AGGGCGAGGA 
700
TTGACTTAAA TGCCGATCCA GTCGAGGAGG AAGACAAGGT AATTGGAGTT 
750
GGATCTAAGC GAAAATTTGA TCTGAATAGG TCCCCCCCAC CAGACGGTGA 
800
TGAAGAGAAC GATGATAAAG TCGAGTGA
850

>AT4G35700.1 longest ORF length:275
MSNPEKSKIA EEENENFDES DYLWSDEEGD IREIVLGLPA LRLSESLNVD 
50
ESIRNEAVSA AKLIVAAAKE ATGNTEQSAS GTGDVSGTPE IIKVGKPRVL 
100
LEALAEASGC TPIGVTTTEG EVVKKPRKKG STQLTHLPQG PPMCNVCGKG 
150
FASWKAVFGH LRQHKDRGYL GFLPPPTFNA AEEGFGGVAT ASTGGAVATA 
200
ISVGEVPTAS SAGGLATASS DGEGLVSSIG RARIDLNADP VEEEDKVIGV 
250
GSKRKFDLNR SPPPDGDEEN DDKVE
300