fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G36060 bHLH11, bHLH011 basic Helix-Loop-Helix 11, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT4G36060.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 394
HindIII A|AGCTT 160, 175, 762
KpnI GGTAC|C 450, 832
NcoI C|CATGG 437, 445
StyI C|C[AT][AT]GG 437, 445
XhoI C|TCGAG 697


Click here to view TAIR data

>AT4G36060.1 length:861
ATGGATCAAC CAATGAAACC AAAAACTTGC TCTGAATCTG ATTTTGCTGA 
50
TGATTCCTCT GCTTCTTCTT CTTCTTCTTC GGGACAAAAT CTCAGAGGAG 
100
CTGAGATGGT GGTGGAAGTG AAGAAGGAAG CAGTTTGTTC CCAGAAAGCA 
150
GAGCGAGAGA AGCTTCGTAG AGATAAGCTT AAGGAACAGT TTCTTGAGCT 
200
TGGAAATGCA CTTGATCCGA ATAGGCCTAA GAGTGACAAA GCCTCAGTTC 
250
TCACTGATAC AATACAAATG CTCAAGGATG TAATGAACCA AGTTGATAGA 
300
CTAAAAGCTG AGTATGAAAC ACTATCTCAA GAGTCTCGTG AGCTAATTCA 
350
AGAGAAGAGT GAGCTGAGAG AGGAGAAAGC GACTTTAAAG TCTGATATCG 
400
AGATTCTTAA TGCTCAATAT CAGCATAGAA TCAAAACCAT GGTTCCATGG 
450
GTACCTCATT ACAGTTATCA TATCCCCTTC GTAGCCATAA CTCAGGGTCA 
500
GTCCAGTTTT ATACCTTATT CAGCCTCTGT CAATCCTCTA ACCGAACAAC 
550
AAGCATCGGT TCAGCAGCAT TCTTCTTCTT CTGCCGATGC TTCAATGAAA 
600
CAAGATTCCA AAATCAAGCC GTTAGATTTG GATCTGATGA TGAACAGTAA 
650
CCATTCAGGT CAAGGAAATG ATCAAAAAGA TGATGTTCGT TTAAAGCTCG 
700
AGCTTAAAAT CCATGCCTCT TCTTTAGCTC AACAGGATGT TTCTGGAAAA 
750
GAGAAGAAAG TAAGCTTGAC AACCACTGCA AGCTCATCGA ATAGTTACTC 
800
ATTATCTCAA GCTGTTCAAG ATAGTTCCCC CGGTACCGTA AATGACATGT 
850
TGAAGCCATA A
900

>AT4G36060.1 longest ORF length:286
MDQPMKPKTC SESDFADDSS ASSSSSSGQN LRGAEMVVEV KKEAVCSQKA 
50
EREKLRRDKL KEQFLELGNA LDPNRPKSDK ASVLTDTIQM LKDVMNQVDR 
100
LKAEYETLSQ ESRELIQEKS ELREEKATLK SDIEILNAQY QHRIKTMVPW 
150
VPHYSYHIPF VAITQGQSSF IPYSASVNPL TEQQASVQQH SSSSADASMK 
200
QDSKIKPLDL DLMMNSNHSG QGNDQKDDVR LKLELKIHAS SLAQQDVSGK 
250
EKKVSLTTTA SSSNSYSLSQ AVQDSSPGTV NDMLKP
300