Locus |
Common name |
Short description |
AT4G36060 |
bHLH11, bHLH011 |
basic Helix-Loop-Helix 11, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2) |
>AT4G36060.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
394 |
HindIII
| A|AGCTT |
160, 175, 762 |
KpnI
| GGTAC|C |
450, 832 |
NcoI
| C|CATGG |
437, 445 |
StyI
| C|C[AT][AT]GG |
437, 445 |
XhoI
| C|TCGAG |
697 |
Click here to view TAIR data
>AT4G36060.1 length:861
ATGGATCAAC CAATGAAACC AAAAACTTGC TCTGAATCTG ATTTTGCTGA | 50 |
TGATTCCTCT GCTTCTTCTT CTTCTTCTTC GGGACAAAAT CTCAGAGGAG | 100 |
CTGAGATGGT GGTGGAAGTG AAGAAGGAAG CAGTTTGTTC CCAGAAAGCA | 150 |
GAGCGAGAGA AGCTTCGTAG AGATAAGCTT AAGGAACAGT TTCTTGAGCT | 200 |
TGGAAATGCA CTTGATCCGA ATAGGCCTAA GAGTGACAAA GCCTCAGTTC | 250 |
TCACTGATAC AATACAAATG CTCAAGGATG TAATGAACCA AGTTGATAGA | 300 |
CTAAAAGCTG AGTATGAAAC ACTATCTCAA GAGTCTCGTG AGCTAATTCA | 350 |
AGAGAAGAGT GAGCTGAGAG AGGAGAAAGC GACTTTAAAG TCTGATATCG | 400 |
AGATTCTTAA TGCTCAATAT CAGCATAGAA TCAAAACCAT GGTTCCATGG | 450 |
GTACCTCATT ACAGTTATCA TATCCCCTTC GTAGCCATAA CTCAGGGTCA | 500 |
GTCCAGTTTT ATACCTTATT CAGCCTCTGT CAATCCTCTA ACCGAACAAC | 550 |
AAGCATCGGT TCAGCAGCAT TCTTCTTCTT CTGCCGATGC TTCAATGAAA | 600 |
CAAGATTCCA AAATCAAGCC GTTAGATTTG GATCTGATGA TGAACAGTAA | 650 |
CCATTCAGGT CAAGGAAATG ATCAAAAAGA TGATGTTCGT TTAAAGCTCG | 700 |
AGCTTAAAAT CCATGCCTCT TCTTTAGCTC AACAGGATGT TTCTGGAAAA | 750 |
GAGAAGAAAG TAAGCTTGAC AACCACTGCA AGCTCATCGA ATAGTTACTC | 800 |
ATTATCTCAA GCTGTTCAAG ATAGTTCCCC CGGTACCGTA AATGACATGT | 850 |
TGAAGCCATA A | 900 |
>AT4G36060.1 longest ORF length:286
MDQPMKPKTC SESDFADDSS ASSSSSSGQN LRGAEMVVEV KKEAVCSQKA | 50 |
EREKLRRDKL KEQFLELGNA LDPNRPKSDK ASVLTDTIQM LKDVMNQVDR | 100 |
LKAEYETLSQ ESRELIQEKS ELREEKATLK SDIEILNAQY QHRIKTMVPW | 150 |
VPHYSYHIPF VAITQGQSSF IPYSASVNPL TEQQASVQQH SSSSADASMK | 200 |
QDSKIKPLDL DLMMNSNHSG QGNDQKDDVR LKLELKIHAS SLAQQDVSGK | 250 |
EKKVSLTTTA SSSNSYSLSQ AVQDSSPGTV NDMLKP | 300 |
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