|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT4G36060 | bHLH11, bHLH011 | basic Helix-Loop-Helix 11, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2) |
>AT4G36060.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
| Name | Recognition sequence | Cut positions |
| EcoRV | GAT|ATC | 340 |
| HindIII | A|AGCTT | 106, 121, 708 |
| KpnI | GGTAC|C | 396, 778 |
| NcoI | C|CATGG | 383, 391 |
| StyI | C|C[AT][AT]GG | 383, 391 |
| XhoI | C|TCGAG | 643 |
Click here to view TAIR data
>AT4G36060.2 length:807
ATGGCTGTGT CATGTTTATT CATAGTTTCG TCTAATTACA GAGGAGCTGA | 50 |
GATGGTGGTG GAAGTGAAGA AGGAAGCAGT TTGTTCCCAG AAAGCAGAGC | 100 |
GAGAGAAGCT TCGTAGAGAT AAGCTTAAGG AACAGTTTCT TGAGCTTGGA | 150 |
AATGCACTTG ATCCGAATAG GCCTAAGAGT GACAAAGCCT CAGTTCTCAC | 200 |
TGATACAATA CAAATGCTCA AGGATGTAAT GAACCAAGTT GATAGACTAA | 250 |
AAGCTGAGTA TGAAACACTA TCTCAAGAGT CTCGTGAGCT AATTCAAGAG | 300 |
AAGAGTGAGC TGAGAGAGGA GAAAGCGACT TTAAAGTCTG ATATCGAGAT | 350 |
TCTTAATGCT CAATATCAGC ATAGAATCAA AACCATGGTT CCATGGGTAC | 400 |
CTCATTACAG TTATCATATC CCCTTCGTAG CCATAACTCA GGGTCAGTCC | 450 |
AGTTTTATAC CTTATTCAGC CTCTGTCAAT CCTCTAACCG AACAACAAGC | 500 |
ATCGGTTCAG CAGCATTCTT CTTCTTCTGC CGATGCTTCA ATGAAACAAG | 550 |
ATTCCAAAAT CAAGCCGTTA GATTTGGATC TGATGATGAA CAGTAACCAT | 600 |
TCAGGTCAAG GAAATGATCA AAAAGATGAT GTTCGTTTAA AGCTCGAGCT | 650 |
TAAAATCCAT GCCTCTTCTT TAGCTCAACA GGATGTTTCT GGAAAAGAGA | 700 |
AGAAAGTAAG CTTGACAACC ACTGCAAGCT CATCGAATAG TTACTCATTA | 750 |
TCTCAAGCTG TTCAAGATAG TTCCCCCGGT ACCGTAAATG ACATGTTGAA | 800 |
GCCATAA | 850 |
>AT4G36060.2 longest ORF length:268
MAVSCLFIVS SNYRGAEMVV EVKKEAVCSQ KAEREKLRRD KLKEQFLELG | 50 |
NALDPNRPKS DKASVLTDTI QMLKDVMNQV DRLKAEYETL SQESRELIQE | 100 |
KSELREEKAT LKSDIEILNA QYQHRIKTMV PWVPHYSYHI PFVAITQGQS | 150 |
SFIPYSASVN PLTEQQASVQ QHSSSSADAS MKQDSKIKPL DLDLMMNSNH | 200 |
SGQGNDQKDD VRLKLELKIH ASSLAQQDVS GKEKKVSLTT TASSSNSYSL | 250 |
SQAVQDSSPG TVNDMLKP | 300 |