fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G36160 ANAC076, VND2 VASCULAR-RELATED NAC-DOMAIN 2, NAC domain containing protein 76 (.1)

>AT4G36160.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 649
NcoI C|CATGG 154, 266
SacI GAGCT|C 64, 516
StyI C|C[AT][AT]GG 154, 266


Click here to view TAIR data

>AT4G36160.1 length:1134
ATGGAATCGG TGGATCAATC ATGTAGTGTT CCTCCGGGAT TCAGATTCCA 
50
TCCAACAGAT GAAGAGCTCG TTGGTTACTA TTTAAGGAAA AAAGTTGCAT 
100
CGCAAAAGAT CGATCTTGAT GTCATAAGAG ATATTGATCT CTACAGAATC 
150
GAACCATGGG ATTTACAAGA GAGCTGCCGA ATCGGATATG AGGAAAGAAA 
200
TGAATGGTAT TTCTTCAGCC ACAAAGATAA GAAATATCCA ACAGGAACAA 
250
GAACAAACAG AGCGACCATG GCTGGGTTTT GGAAAGCCAC GGGCCGAGAC 
300
AAGGCTGTTT ACGACAAGTC AAAACTGATT GGTATGAGAA AAACACTTGT 
350
GTTCTACAAA GGAAGAGCCC CTAATGGCCA AAAAACCGAT TGGATCATGC 
400
ATGAATACCG GCTAGAGTCA GATGAGAATG CACCTCCTCA GGAAGAAGGG 
450
TGGGTGGTTT GTAGAGCGTT CAAGAAAAAG CCAATGACCG GGCAAGCCAA 
500
GAACACAGAA ACTTGGAGCT CAAGTTACTT TTACGACGAA TTACCGAGTG 
550
GAGTACGCTC AGTTACGGAG CCTCTTAACT ACGTATCTAA GCAGAAACAA 
600
AACGTTTTTG CACAAGATTT AATGTTCAAG CAAGAACTAG AAGGATCAGA 
650
TATCGGTTTA AACTTCATCC ACTGCGATCA ATTCATTCAA CTTCCGCAGC 
700
TTGAAAGCCC TTCACTCCCT CTTACCAAAA GACCAGTGAG CTTGACGTCA 
750
ATTACATCAT TGGAGAAGAA TAAAAATATC TACAAAAGAC ATTTAATAGA 
800
AGAGGATGTG AGCTTCAATG CGCTAATAAG TAGTGGAAAT AAAGATAAGA 
850
AGAAGAAGAA AACATCAGTG ATGACGACGG ATTGGAGAGC ACTCGATAAA 
900
TTTGTTGCTT CTCAACTTAT GAGCCAAGAA GATGGAGTTT CGGGTTTTGG 
950
AGGTCATCAT GAAGAAGATA ACAATAAAAT CGGTCATTAC AATAACGAAG 
1000
AGAGCAATAA CAAGGGATCA GTAGAGACTG CTTCTTCCAC GTTATTGAGT 
1050
GATAGAGAAG AAGAGAACAG ATTCATCAGT GGATTATTGT GTTCCAACTT 
1100
GGACTATGAC TTATATAGGG ATTTACATGT TTGA
1150

>AT4G36160.1 longest ORF length:377
MESVDQSCSV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIRDIDLYRI 
50
EPWDLQESCR IGYEERNEWY FFSHKDKKYP TGTRTNRATM AGFWKATGRD 
100
KAVYDKSKLI GMRKTLVFYK GRAPNGQKTD WIMHEYRLES DENAPPQEEG 
150
WVVCRAFKKK PMTGQAKNTE TWSSSYFYDE LPSGVRSVTE PLNYVSKQKQ 
200
NVFAQDLMFK QELEGSDIGL NFIHCDQFIQ LPQLESPSLP LTKRPVSLTS 
250
ITSLEKNKNI YKRHLIEEDV SFNALISSGN KDKKKKKTSV MTTDWRALDK 
300
FVASQLMSQE DGVSGFGGHH EEDNNKIGHY NNEESNNKGS VETASSTLLS 
350
DREEENRFIS GLLCSNLDYD LYRDLHV
400