Locus |
Common name |
Short description |
AT4G36620 |
GATA19, HANL2 |
hanaba taranu like 2, GATA transcription factor 19 (.1) |
>AT4G36620.1 CDS map
>>Show genomic map

Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspMI, BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, ClaI, DdeI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, N.BstNBI, , NarI, NciI, NcoI, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PshAI, PspGI, PspOMI, PvuI, RsaI, SacI, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
34, 556 |
AciI
| C|CGC |
342 |
AluI
| AG|CT |
379 |
AvaII
| G|G[AT]CC |
270, 279, 604 |
BanI
| G|GPyPuCC |
464 |
BclI
| T|GATCA |
549 |
BsaHI
| GPu|CGPyC |
34, 556 |
BsaJI
| C|CNNGG |
460 |
BsaWI
| [AT]|CCGG[AT] |
602 |
BsiEI
| CGPuPy|CG |
341, 600 |
BslI
| CCNNNNN|NNGG |
160 |
BspHI
| T|CATGA |
552 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
464 |
BsrFI
| Pu|CCGGPy |
504, 607 |
BstF5I
| GGATGNN| |
118 |
Cac8I
| GCN|NGC |
220, 504 |
Cfr10I
| [AG]|CCGG[TC] |
504, 607 |
DpnI
| GA-CH3|TC |
369, 398, 548 |
DpnII
| |GATC |
369, 398, 548 |
EaeI
| Py|GGCCPu |
506 |
EcoO109I
| PuG|GNCCPy |
280 |
Fnu4HI
| GC|NGC |
199, 378 |
HaeIII
| GG|CC |
505, 608 |
HhaI
| GCG|C |
228 |
HinP1I
| G|CGC |
228 |
HincII
| GTPy|PuAC |
67 |
HinfI
| G|ANTC |
130, 307, 313 |
HpaII
| C|CGG |
360, 503, 601, 606 |
Hpy188I
| TCN|GA |
147, 310, 538 |
Hpy99I
| CG[AT]CG| |
32, 454, 593 |
HpyCH4III
| ACN|GT |
175, 268 |
HpyCH4IV
| A|CGT |
33, 124, 331, 525, 555, 591 |
HpyCH4V
| TG|CA |
71, 107, 334, 376, 412 |
MboI
| |GATC |
369, 398, 548 |
MseI
| T|TAA |
588 |
MspA1I
| C[AC]G|C[GT]G |
380 |
MspI
| C|CGG |
360, 503, 601, 606 |
MwoI
| GCNNNNN|NNGC |
196, 235, 342, 470 |
NaeI
| GCC|GGC |
504 |
NdeI
| CA|TATG |
56 |
NgoMIV
| G|CCGGC |
504 |
NlaIII
| CATG| |
551 |
NlaIV
| GGN|NCC |
178, 280, 464 |
PflMI
| CCANNNN|NTGG |
160 |
PpuMI
| PuG|G[AT]CCPy |
280 |
PsiI
| TTA|TAA |
426 |
PstI
| CTGCA|G |
377 |
PvuII
| CAG|CTG |
380 |
RsrII
| CG|G[AT]CCG |
605 |
Sau3AI
| |GATC |
369, 398, 548 |
Sau96I
| G|GNCC |
270, 279, 604 |
SfcI
| C|TPuPyAG |
377 |
StyI
| C|C[AT][AT]GG |
460 |
Taq��I
| T|CGA |
338, 353 |
TfiI
| G|A[AT]TC |
130, 307, 313 |
TseI
| G|C[AT]GC |
378 |
Tsp45I
| |GT[CG]AC |
558 |
Tsp509I
| |AATT |
416 |
Click here to view TAIR data
>AT4G36620.1 length:636
ATGGGTTTCT CAATGTTCTT CTCCCCCGAA AACGACGTCA GCCATCATTC | 50 |
CTCTCCATAT GCTTCTGTTG ACTGCACTCT CTCACTTGGA ACTCCCTCCA | 100 |
CTCGCCTCTG CAACGAGGAT GATGAACGTA GATTCTCGTC TCATACCTCC | 150 |
GACACCATAG GCTGGGACTT CTTGAACGGT TCCAAGAAAG GCGGTGGAGG | 200 |
CGGCGGACAT AACCTCCTCG CTCGCCGTTG CGCCAACTGC GACACCACTT | 250 |
CTACTCCTCT TTGGAGAAAC GGTCCAAGAG GTCCCAAGTC GTTGTGTAAT | 300 |
GCGTGTGGAA TCCGATTCAA GAAAGAAGAG AGACGTGCAT CGACCGCCAG | 350 |
AAACTCGACC TCCGGCGGAG GATCAACTGC AGCTGGAGTT CCAACTTTGG | 400 |
ATCATCAAGC AAGTGCAAAT TATTATTATA ACAATAATAA CCAATATGCT | 450 |
TCATCGTCGC CTTGGCACCA TCAGCATAAT ACGCAGAGAG TTCCATATTA | 500 |
CTCGCCGGCC AATAACGAAT ACTCATACGT TGATGATGTC AGAGTTGTTG | 550 |
ATCATGACGT CACAACCGAC CCGTTCTTGT CTTGGAGGCT TAACGTCGCC | 600 |
GACCGGACCG GCCTTGTCCA CGATTTTACG ATGTGA | 650 |
>AT4G36620.1 longest ORF length:211
MGFSMFFSPE NDVSHHSSPY ASVDCTLSLG TPSTRLCNED DERRFSSHTS | 50 |
DTIGWDFLNG SKKGGGGGGH NLLARRCANC DTTSTPLWRN GPRGPKSLCN | 100 |
ACGIRFKKEE RRASTARNST SGGGSTAAGV PTLDHQASAN YYYNNNNQYA | 150 |
SSSPWHHQHN TQRVPYYSPA NNEYSYVDDV RVVDHDVTTD PFLSWRLNVA | 200 |
DRTGLVHDFT M | 250 |
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