fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G36710 AtHAM4 Arabidopsis thaliana HAIRY MERISTEM 4, GRAS family transcription factor (.1)

>AT4G36710.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SmaI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 581
BglII A|GATCT 372, 457, 1220
HpaI GTT|AAC 1015
PstI CTGCA|G 1160
SacI GAGCT|C 669
SalI G|TCGAC 343
SpeI A|CTAGT 831


Click here to view TAIR data

>AT4G36710.1 length:1461
ATGAAAATCC CTGCATCATC TCCTCAAGAC ACGACCAACA ACAACAACAA 
50
CACTAATAGT ACTGATAGTA ATCACTTATC AATGGACGAA CATGTCATGC 
100
GTTCAATGGA TTGGGATTCC ATCATGAAAG AATTGGAGCT TGATGACGAT 
150
TCTGCTCCTA ACTCACTTAA AACCGGTTTC ACCACAACCA CAACAGATTC 
200
TACTATTTTG CCTCTTTACG CCGTCGATTC AAATCTCCCT GGCTTTCCCG 
250
ATCAGATTCA ACCGTCGGAT TTCGAATCGT CTTCCGATGT TTATCCTGGT 
300
CAGAACCAAA CAACTGGGTA CGGTTTTAAT TCTCTTGATA GTGTCGACAA 
350
TGGAGGATTT GATTTCATTG AAGATCTCAT CCGAGTCGTG GATTGTGTTG 
400
AATCGGACGA GTTACAACTC GCTCAGGTGG TTTTATCACG GCTTAATCAA 
450
CGCTTGAGAT CTCCGGCGGG TAGACCGTTA CAGAGAGCTG CGTTTTACTT 
500
TAAGGAAGCT CTCGGTTCGT TTTTAACCGG ATCAAACCGG AATCCAATCC 
550
GGTTATCTTC TTGGTCCGAG ATTGTTCAGA GGATCCGAGC GATTAAGGAA 
600
TATTCCGGGA TTTCTCCGAT CCCTCTCTTC TCTCATTTCA CGGCGAATCA 
650
AGCGATACTC GATTCGTTGA GCTCGCAGTC GTCTTCTCCG TTTGTTCACG 
700
TGGTGGATTT TGAGATTGGA TTCGGTGGCC AATACGCATC GCTTATGAGA 
750
GAAATCACTG AGAAATCTGT AAGCGGTGGA TTTTTAAGAG TTACGGCAGT 
800
GGTGGCGGAG GAGTGCGCCG TAGAGACGCG ACTAGTGAAA GAAAACCTAA 
850
CTCAATTCGC GGCGGAGATG AAAATTCGTT TCCAGATTGA GTTTGTGCTG 
900
ATGAAGACTT TTGAGATGTT ATCTTTCAAA GCGATTAGGT TTGTTGAGGG 
950
GGAGAGGACC GTCGTTTTGA TTTCCCCGGC GATATTTCGT CGTCTAAGTG 
1000
GAATCACTGA TTTTGTTAAC AATTTACGGA GAGTATCACC TAAGGTCGTT 
1050
GTATTCGTGG ATAGTGAAGG ATGGACGGAG ATCGCCGGAT CTGGATCATT 
1100
CCGGCGAGAG TTTGTTAGCG CTCTTGAGTT CTACACGATG GTGCTGGAGT 
1150
CGCTCGACGC TGCAGCTCCT CCCGGAGATT TGGTGAAGAA GATAGTGGAA 
1200
GCGTTCGTTC TACGACCGAA GATCTCCGCT GCGGTAGAAA CGGCGGCTGA 
1250
CAGGAGACAC ACCGGCGAAA TGACTTGGCG GGAAGCGTTT TGCGCCGCCG 
1300
GGATGAGGCC GATACAGCTA AGCCAGTTCG CCGACTTTCA AGCTGAGTGT 
1350
TTATTGGAGA AAGCGCAAGT TAGAGGATTC CACGTGGCGA AACGACAAGG 
1400
AGAATTGGTG CTGTGCTGGC ATGGAAGAGC ACTTGTTGCC ACATCAGCTT 
1450
GGCGGTTTTA G
1500

>AT4G36710.1 longest ORF length:486
MKIPASSPQD TTNNNNNTNS TDSNHLSMDE HVMRSMDWDS IMKELELDDD 
50
SAPNSLKTGF TTTTTDSTIL PLYAVDSNLP GFPDQIQPSD FESSSDVYPG 
100
QNQTTGYGFN SLDSVDNGGF DFIEDLIRVV DCVESDELQL AQVVLSRLNQ 
150
RLRSPAGRPL QRAAFYFKEA LGSFLTGSNR NPIRLSSWSE IVQRIRAIKE 
200
YSGISPIPLF SHFTANQAIL DSLSSQSSSP FVHVVDFEIG FGGQYASLMR 
250
EITEKSVSGG FLRVTAVVAE ECAVETRLVK ENLTQFAAEM KIRFQIEFVL 
300
MKTFEMLSFK AIRFVEGERT VVLISPAIFR RLSGITDFVN NLRRVSPKVV 
350
VFVDSEGWTE IAGSGSFRRE FVSALEFYTM VLESLDAAAP PGDLVKKIVE 
400
AFVLRPKISA AVETAADRRH TGEMTWREAF CAAGMRPIQL SQFADFQAEC 
450
LLEKAQVRGF HVAKRQGELV LCWHGRALVA TSAWRF
500