fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G36730 GBF1 G-box binding factor 1 (.1.2)

>AT4G36730.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 329, 501
NdeI CA|TATG 199
SacI GAGCT|C 658
SmaI CCC|GGG 249, 585
StyI C|C[AT][AT]GG 555
XbaI T|CTAGA 709, 894


Click here to view TAIR data

>AT4G36730.2 length:942
ATGGGAACGA GCGAAGACAA GATGCCATTT AAGACTACCA AACCAACATC 
50
TTCGGCTCAG GAAGTTCCTC CCACACCGTA TCCAGATTGG CAAAATTCAA 
100
TGCAGGCTTA TTATGGCGGA GGAGGTACTC CAAATCCTTT TTTCCCATCC 
150
CCAGTTGGAT CTCCTAGTCC TCACCCCTAT ATGTGGGGTG CTCAACACCA 
200
TATGATGCCG CCTTATGGCA CCCCAGTTCC GTACCCAGCA ATGTATCCCC 
250
CGGGGGCAGT CTATGCTCAT CCTAGCATGC CCATGCCTCC TAATTCTGGT 
300
CCTACCAACA AGGAGCCTGC GAAGGACCAA GCTTCTGGCA AGAAGTCAAA 
350
GGGGAACTCG AAAAAAAAGG CTGAAGGAGG TGATAAAGCG CTCTCTGGTT 
400
CAGGGAACGA TGGTGCCTCT CATAGTGATG AAAGTGTCAC AGCGGGTTCA 
450
TCTGATGAAA ATGATGAGAA TGCCAATCAA CAGGGTTCAA TTCGAAAGCC 
500
AAGCTTTGGA CAGATGCTTG CTGACGCAAG TTCTCAAAGT ACGACTGGTG 
550
AAATCCAAGG TTCGGTGCCC ATGAAGCCGG TAGCCCCGGG GACTAATCTG 
600
AATATCGGGA TGGACTTATG GTCTTCCCAA GCTGGTGTAC CAGTGAAGGA 
650
TGAACGAGAG CTCAAGCGGC AGAAGAGGAA ACAATCTAAC CGTGAATCCG 
700
CTAGGCGGTC TAGATTGCGG AAGCAGGCCG AATGCGAACA ACTTCAACAA 
750
AGAGTAGAGA GTTTGTCGAA CGAGAATCAA AGCCTGAGAG ATGAGCTACA 
800
GAGACTCTCA AGCGAATGTG ATAAGCTCAA GTCTGAGAAC AACTCAATCC 
850
AGGATGAGTT GCAGAGAGTA CTTGGAGCAG AGGCTGTAGC TAATCTAGAA 
900
CAGAATGCTG CTGGGTCGAA AGATGGTGAA GGAACAAATT AA
950

>AT4G36730.2 longest ORF length:313
MGTSEDKMPF KTTKPTSSAQ EVPPTPYPDW QNSMQAYYGG GGTPNPFFPS 
50
PVGSPSPHPY MWGAQHHMMP PYGTPVPYPA MYPPGAVYAH PSMPMPPNSG 
100
PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS 
150
SDENDENANQ QGSIRKPSFG QMLADASSQS TTGEIQGSVP MKPVAPGTNL 
200
NIGMDLWSSQ AGVPVKDERE LKRQKRKQSN RESARRSRLR KQAECEQLQQ 
250
RVESLSNENQ SLRDELQRLS SECDKLKSEN NSIQDELQRV LGAEAVANLE 
300
QNAAGSKDGE GTN
350