| Locus |
Common name |
Short description |
| AT4G36740 |
HB-5, ATHB40 |
homeobox protein 40 (.1) |
>AT4G36740.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PleI, PmeI, PmlI, PpuMI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, Tsp45I, TspRI, Tth111I, XbaI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AccI
| GT|[AC][TG]AC |
58, 382 |
| AccII(FnuDII)
| CG|CG |
308 |
| AciI
| C|CGC |
135 |
| AflIII
| A|CPuPyGT |
194 |
| AluI
| AG|CT |
171, 261, 414, 520 |
| AvaI
| C|PyCGPuG |
334 |
| BamHI
| G|GATCC |
124 |
| BanI
| G|GPyPuCC |
597 |
| BclI
| T|GATCA |
18, 579 |
| BfaI
| C|TAG |
263 |
| BsaJI
| C|CNNGG |
128 |
| BsaWI
| [AT]|CCGG[AT] |
594 |
| BslI
| CCNNNNN|NNGG |
540 |
| BsoBI
| C|PyCGPuG |
334 |
| BspDI
| AT|CGAT |
616 |
| BspT107I(HgiCI)
| G|G[TC][AG]CC |
597 |
| BssKI
| |CCNGG |
78 |
| BstF5I
| GGATGNN| |
16, 217, 633 |
| BstNI
| CC|[AT]GG |
78 |
| BstUI
| CG|CG |
308 |
| BstYI
| Pu|GATCPy |
124 |
| BtgI
| C|CPuPyGG |
128 |
| ClaI
| AT|CGAT |
616 |
| DdeI
| C|TNAG |
64, 403 |
| DpnI
| GA-CH3|TC |
17, 123, 578 |
| DpnII
| |GATC |
17, 123, 578 |
| DrdI
| GACNNNN|NNGTC |
553 |
| Fnu4HI
| GC|NGC |
92, 255 |
| HhaI
| GCG|C |
309 |
| HinP1I
| G|CGC |
309 |
| HincII
| GTPy|PuAC |
382 |
| HinfI
| G|ANTC |
231, 399, 635 |
| HpaII
| C|CGG |
593, 599 |
| Hpy188I
| TCN|GA |
20, 65, 234, 299, 402, 556 |
| Hpy99I
| CG[AT]CG| |
306, 374, 515 |
| HpyCH4III
| ACN|GT |
9, 44, 151, 304, 314, 490 |
| HpyCH4IV
| A|CGT |
372 |
| HpyCH4V
| TG|CA |
436 |
| MboI
| |GATC |
17, 123, 578 |
| MspI
| C|CGG |
593, 599 |
| MwoI
| GCNNNNN|NNGC |
98 |
| N.BstNBI
| GAGTCNNNN|N |
236, 640 |
| NlaIII
| CATG| |
25, 193, 365 |
| NlaIV
| GGN|NCC |
124, 597 |
| NspI
| PuCATG|Py |
194 |
| PaeR7I
| C|TCGAG |
334 |
| PciI
| A|CATGT |
194 |
| PflMI
| CCANNNN|NTGG |
540 |
| PshAI
| GACNN|NNGTC |
278 |
| PspGI
| |CC[AT]GG |
78 |
| RsaI
| GT|AC |
46, 71, 343 |
| SalI
| G|TCGAC |
382 |
| Sau3AI
| |GATC |
17, 123, 578 |
| ScrFI
| CC|NGG |
78 |
| SmlI
| C|TPyPuAG |
229, 334, 355, 483 |
| Taqƒ¿I
| T|CGA |
333, 381, 516, 615 |
| TfiI
| G|A[AT]TC |
399 |
| TliI
| C|TCGAG |
334 |
| TseI
| G|C[AT]GC |
92 |
| Tsp509I
| |AATT |
496 |
| XcmI
| CCANNNNN|NNNNTGG |
128 |
| XhoI
| C|TCGAG |
334 |
Click here to view TAIR data
>AT4G36740.1 length:651
ATGAACTACA CGGTGGATGA TCAGAACATG GCTTTTATCT CTCAACTGTA | 50 |
CCCTGATGTC TACACTCAGA TAGTACAACC AGGAGAAGTG AAGCAGCCGA | 100 |
AGCGGAGGAG GAAGAAGACC AAAGGATCCG TGGCTTCCGC AGATGGAGGC | 150 |
AACGGTTTGT TTAGAAAGAG GAAGCTGACC GATGAACAAG TGAACATGTT | 200 |
GGAGATGAGT TTTGGGGATG AACACAAACT TGAGTCGGAG AGGAAAGATA | 250 |
GACTTGCGGC AGAGCTAGGG CTTGACCCTC GTCAAGTTGC CGTTTGGTTT | 300 |
CAGAACCGTC GCGCACGGTG GAAGAACAAA AGGCTCGAGG AAGAGTACAA | 350 |
TAAACTCAAG AACTCACATG ATAACGTCGT TGTCGACAAG TGCCGACTTG | 400 |
AATCTGAGGT TATTCAGCTC AAAGAACAAC TCTATGATGC AGAGAGGGAA | 450 |
ATCCAAAGAT TAGCAGAAAG AGTAGAAGGA GGCTCAAGCA ACAGTCCAAT | 500 |
TTCGTCTTCC GTTTCCGTCG AAGCTAATGA AACGCCATTT TTTGGAGACT | 550 |
ATAAAGTCGG AGATGATGGC GATGACTATG ATCACTTGTT TTATCCGGTG | 600 |
CCGGAAAATA GTTACATCGA TGAAGCGGAA TGGATGAGTC TATACATATA | 650 |
A | 700 |
>AT4G36740.1 longest ORF length:216
MNYTVDDQNM AFISQLYPDV YTQIVQPGEV KQPKRRRKKT KGSVASADGG | 50 |
NGLFRKRKLT DEQVNMLEMS FGDEHKLESE RKDRLAAELG LDPRQVAVWF | 100 |
QNRRARWKNK RLEEEYNKLK NSHDNVVVDK CRLESEVIQL KEQLYDAERE | 150 |
IQRLAERVEG GSSNSPISSS VSVEANETPF FGDYKVGDDG DDYDHLFYPV | 200 |
PENSYIDEAE WMSLYI | 250 |
|