fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G36870 BLH2, SAW1 SAWTOOTH 1, BEL1-like homeodomain 2 (.1.2)

>AT4G36870.2 CDS map

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Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AfeI, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, EarI, EciI, EcoNI, EcoO109I, FauI, FokI, FseI, FspI, HaeII, HgaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PspGI, PspOMI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, SwaI, Tth111I, XbaI, XmaI
Name Recognition sequence Cut positions
AccI GT|[AC][TG]AC 238
AccII(FnuDII) CG|CG 961, 1416, 1505, 2026
AciI C|CGC 396, 402, 408, 437, 443, 960, 1272, 1415, 1851, 1971, 1983, 2034
AclI AA|CGTT 2098
AflII C|TTAAG 936, 1339
AflIII A|CPuPyGT 512, 2027, 2047, 2132
AluI AG|CT 582, 1031, 1070, 1288, 1335, 1489, 1540
ApoI Pu|AATTPy 2004
AseI AT|TAAT 1915
AvaI C|PyCGPuG 945
AvaII G|G[AT]CC 673, 1181, 1825
BfaI C|TAG 1430, 1653
BglII A|GATCT 303
BlpI GC|TNAGC 1334
BsaAI PyAC|GTPu 682, 2046
BsaBI GATNN|NNATC 77, 638
BsaHI GPu|CGPyC 1119
BsaJI C|CNNGG 105, 279, 312, 481, 917, 1251
BsaWI [AT]|CCGG[AT] 234, 326
BsiEI CGPuPy|CG 138, 959, 1085
BsiHKAI G[AT]GC[AT]|C 1782
BslI CCNNNNN|NNGG 226, 1256, 1506
BsmI GAATGCN| 379
BsoBI C|PyCGPuG 945
Bsp1286I G[GAT]GC[CAT]|C 1782
BsrFI Pu|CCGGPy 250
BsrI ACTGGN| 1612, 2125
BssKI |CCNGG 279, 1393
BstAPI GCANNNN|NTGC 1442
BstBI TT|CGAA 1552
BstF5I GGATGNN| 2089
BstUI CG|CG 961, 1416, 1505, 2026
BstYI Pu|GATCPy 303, 1906
BtgI C|CPuPyGG 917, 1251
Cac8I GCN|NGC 1205
Cfr10I [AG]|CCGG[TC] 250
DdeI C|TNAG 166, 1333, 1536, 1902, 2021
DpnI GA-CH3|TC 141, 302, 632, 888, 1124, 1748, 1905
DpnII |GATC 141, 302, 632, 888, 1124, 1748, 1905
DrdI GACNNNN|NNGTC 621
EaeI Py|GGCCPu 315, 959, 1085, 1498
EagI C|GGCCG 959, 1085
EcoRI G|AATTC 2004
EcoRV GAT|ATC 609
Fnu4HI GC|NGC 286, 405, 747, 900, 921, 960, 1069, 1257, 1329, 1374, 1496, 1878, 1971, 1983
HaeIII GG|CC 314, 958, 1084, 1247, 1497, 1892
HhaI GCG|C 962
HinP1I G|CGC 962
HincII GTPy|PuAC 1398, 2051, 2095
HindIII A|AGCTT 1490
HinfI G|ANTC 133, 147, 207, 230, 243, 387, 431, 836, 1381, 1701
HpaI GTT|AAC 1398, 2095
HpaII C|CGG 219, 233, 249, 279, 325, 368, 896, 1086, 1392
Hpy188I TCN|GA 144, 261, 359, 551, 886, 1122, 1127, 1448, 1823, 1866, 1992, 2022
Hpy99I CG[AT]CG| 613, 1081, 1185, 1772, 1931
HpyCH4III ACN|GT 455, 675, 1187, 1252, 1265, 1453, 1897, 2014
HpyCH4IV A|CGT 614, 681, 2045, 2097, 2130
HpyCH4V TG|CA 414, 576, 748, 1212, 1321, 1372, 1582
MboI |GATC 141, 302, 632, 888, 1124, 1748, 1905
MluI A|CGCGT 2027
MseI T|TAA 158, 270, 875, 935, 1314, 1338, 1397, 1914, 2094
MslI CAPyNN|NNPuTG 1243
MspA1I C[AC]G|C[GT]G 288, 693, 923, 1376, 1985
MspI C|CGG 219, 233, 249, 279, 325, 368, 896, 1086, 1392
MwoI GCNNNNN|NNGC 350, 378, 405, 602, 756, 1287, 1329, 1442, 1860, 1878, 1980, 2034
NciI CC|[CG]GG 279, 1393
NcoI C|CATGG 917
NdeI CA|TATG 568
NlaIII CATG| 412, 511, 916, 1165, 2083, 2167
NlaIV GGN|NCC 485, 673, 787
NsiI ATGCA|T 577
NspI PuCATG|Py 512, 2168
PaeR7I C|TCGAG 945
PciI A|CATGT 512
PmlI CAC|GTG 682, 2046
PsiI TTA|TAA 2102
PstI CTGCA|G 749
RsaI GT|AC 949, 1189, 1267, 1690
Sau3AI |GATC 141, 302, 632, 888, 1124, 1748, 1905
Sau96I G|GNCC 673, 1181, 1247, 1825
ScrFI CC|NGG 279, 1393
SfcI C|TPuPyAG 749
SmlI C|TPyPuAG 346, 936, 945, 1339
SspI AAT|ATT 364
StyI C|C[AT][AT]GG 105, 481, 917
Taqƒ¿I T|CGA 135, 306, 611, 944, 1233, 1551, 1603, 2070
TfiI G|A[AT]TC 133, 147, 207, 230, 243, 387, 431, 1381, 1701
TliI C|TCGAG 945
TseI G|C[AT]GC 286, 405, 747, 900, 921, 1069, 1374, 1878
Tsp45I |GT[CG]AC 2128
Tsp509I |AATT 31, 56, 155, 272, 494, 791, 828, 848, 882, 1637, 1728, 2003
TspRI NNCA[CG]TGNN| 1816
XcmI CCANNNNN|NNNNTGG 669
XhoI C|TCGAG 945
XmnI GAANN|NNTTC 1231, 1386


Click here to view TAIR data

>AT4G36870.2 length:2220
ATGGGAATAA CTAAAACTTC TCCTAATACT ACAATTCTCT TGAAGACTTT 
50
TCACAATAAT TCTATGTCCC AAGATTATCA TCATCATCAT CATCATAATC 
100
AACACCAAGG AGGTATCTTC AACTTCTCTA ATGGATTCGA CCGATCAGAT 
150
TCTCCCAATT TAACAACTCA GCAGAAGCAA GAGCATCAAA GGGTAGAGAT 
200
GGACGAGGAA TCTTCAGTCG CCGGAGGTAG GATTCCGGTC TACGAATCAG 
250
CCGGTATGTT ATCCGAAATG TTTAATTTCC CCGGAAGCAG CGGTGGAGGA 
300
AGAGATCTCG ACCTCGGCCA ATCTTTCCGG TCAAATAGGC AGTTGCTTGA 
350
GGAGCAACAT CAGAATATTC CGGCTATGAA TGCTACGGAT TCAGCCACCG 
400
CCACCGCAGC CGCCATGCAG TTATTCTTGA TGAATCCACC GCCACCGCAA 
450
CAACCACCGT CTCCGTCATC CACAACTTCC CCAAGGAGCC ACCACAATTC 
500
TTCAACTCTT CACATGTTAC TTCCAAGTCC ATCCACCAAC ACAACTCACC 
550
ATCAGAACTA CACTAATCAT ATGTCTATGC ATCAGCTTCC ACATCAGCAT 
600
CACCAGCAGA TATCGACGTG GCAGTCTTCT CCCGATCATC ATCATCATCA 
650
TCACAACAGC CAAACGGAGA TTGGGACCGT CCACGTGGAA AACAGCGGAG 
700
GACACGGAGG ACAAGGCTTG TCCTTATCTC TCTCATCGTC TTTAGAGGCT 
750
GCAGCAAAAG CGGAAGAGTA TAGAAACATT TACTACGGAG CCAATTCTTC 
800
TAACGCATCA CCTCATCATC AATACAATCA ATTCAAGACT CTTCTTGCTA 
850
ATTCTTCTCA ACATCACCAT CAAGTATTAA ACCAATTCCG ATCATCTCCG 
900
GCTGCTTCTT CCTCTTCCAT GGCAGCGGTC AATATCTTAA GAAACTCGAG 
950
GTACACAACG GCCGCGCAAG AGTTGTTGGA AGAGTTTTGT AGTGTTGGAA 
1000
GAGGATTTTT GAAGAAGAAC AAACTTGGGA ACAGCTCAAA CCCTAATACT 
1050
TGCGGTGGTG ATGGTGGTGG CAGCTCTCCT TCGTCGGCCG GAGCAAACAA 
1100
GGAGCATCCT CCTTTATCGG CGTCTGATCG GATTGAGCAT CAAAGAAGGA 
1150
AAGTGAAACT ACTCACCATG CTTGAAGAGG TGGACCGACG GTACAACCAT 
1200
TACTGCGAGC AAATGCAGAT GGTTGTGAAC TCTTTCGACA TAGTAATGGG 
1250
CCACGGTGCG GCATTACCGT ACACCGCATT GGCTCAAAAA GCTATGTCAA 
1300
GACATTTTAG ATGCCTTAAA GATGCAGTTG CGGCTCAGCT TAAGCAGAGT 
1350
TGCGAACTTC TTGGGGACAA AGATGCAGCG GGAATCTCTT CTTCCGGGTT 
1400
AACAAAAGGT GAAACTCCGC GTTTGCGTTT GCTAGAGCAA AGTTTGCGTC 
1450
AGAACCGTGC GTTTCATCAA ATGGGTATGA TGGAACAAGA AGCTTGGCGG 
1500
CCACAACGCG GTTTGCCTGA ACGCTCCGTC AATATACTTA GAGCTTGGCT 
1550
CTTCGAACAT TTCCTTCACC CGTATCCAAG TGATGCAGAT AAACACCTAT 
1600
TGGCTCGACA GACTGGTTTA TCCAGAAATC AGGTATCAAA TTGGTTCATA 
1650
AATGCTAGGG TTCGTTTATG GAAACCAATG GTGGAAGAAA TGTACCAACA 
1700
AGAATCAAAA GAAAGAGAAA GAGAAGAGGA ATTAGAAGAG AACGAAGAAG 
1750
ATCAAGAAAC AAAAAACAGC AACGACGACA AGAGCACAAA ATCCAACAAC 
1800
AATGAAAGCA ACTTCACTGC CGTTCGGACC ACTTCACAAA CTCCAACGAC 
1850
AACCGCACCA GACGCATCAG ACGCAGACGC AGCAGTAGCG ACAGGCCACC 
1900
GTCTAAGATC CAACATTAAT GCTTACGAAA ACGACGCTTC ATCACTTCTA 
1950
CTCCCTTCCT CTTATTCCAA CGCCGCCGCT CCTGCCGCTG TTTCTGACGA 
2000
CTTGAATTCT CGTTACGGTG GCTCAGACGC GTTTTCCGCC GTTGCCACGT 
2050
GTCAACAAAG TGTAGGTGGG TTCGATGATG CTGACATGGA TGGTGTTAAC 
2100
GTTATAAGGT TTGGGACAAA CCCTACTGGT GACGTGTCTC TCACGCTTGG 
2150
TTTACGCCAC GCTGGAAACA TGCCTGACAA AGACGCTTCT TTCTGCGTTA 
2200
GAGAGTTTGG GGGTTTTTAG 
2250

>AT4G36870.2 longest ORF length:739
MGITKTSPNT TILLKTFHNN SMSQDYHHHH HHNQHQGGIF NFSNGFDRSD 
50
SPNLTTQQKQ EHQRVEMDEE SSVAGGRIPV YESAGMLSEM FNFPGSSGGG 
100
RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ 
150
QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH 
200
HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA 
250
AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP 
300
AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT 
350
CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH 
400
YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS 
450
CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR 
500
PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI 
550
NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN 
600
NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL 
650
LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN 
700
VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF
750