Locus |
Common name |
Short description |
AT4G36870 |
BLH2, SAW1 |
SAWTOOTH 1, BEL1-like homeodomain 2 (.1.2) |
>AT4G36870.2 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AfeI, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, EarI, EciI, EcoNI, EcoO109I, FauI, FokI, FseI, FspI, HaeII, HgaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PspGI, PspOMI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, SwaI, Tth111I, XbaI, XmaI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
238 |
AccII(FnuDII)
| CG|CG |
961, 1416, 1505, 2026 |
AciI
| C|CGC |
396, 402, 408, 437, 443, 960, 1272, 1415, 1851, 1971, 1983, 2034 |
AclI
| AA|CGTT |
2098 |
AflII
| C|TTAAG |
936, 1339 |
AflIII
| A|CPuPyGT |
512, 2027, 2047, 2132 |
AluI
| AG|CT |
582, 1031, 1070, 1288, 1335, 1489, 1540 |
ApoI
| Pu|AATTPy |
2004 |
AseI
| AT|TAAT |
1915 |
AvaI
| C|PyCGPuG |
945 |
AvaII
| G|G[AT]CC |
673, 1181, 1825 |
BfaI
| C|TAG |
1430, 1653 |
BglII
| A|GATCT |
303 |
BlpI
| GC|TNAGC |
1334 |
BsaAI
| PyAC|GTPu |
682, 2046 |
BsaBI
| GATNN|NNATC |
77, 638 |
BsaHI
| GPu|CGPyC |
1119 |
BsaJI
| C|CNNGG |
105, 279, 312, 481, 917, 1251 |
BsaWI
| [AT]|CCGG[AT] |
234, 326 |
BsiEI
| CGPuPy|CG |
138, 959, 1085 |
BsiHKAI
| G[AT]GC[AT]|C |
1782 |
BslI
| CCNNNNN|NNGG |
226, 1256, 1506 |
BsmI
| GAATGCN| |
379 |
BsoBI
| C|PyCGPuG |
945 |
Bsp1286I
| G[GAT]GC[CAT]|C |
1782 |
BsrFI
| Pu|CCGGPy |
250 |
BsrI
| ACTGGN| |
1612, 2125 |
BssKI
| |CCNGG |
279, 1393 |
BstAPI
| GCANNNN|NTGC |
1442 |
BstBI
| TT|CGAA |
1552 |
BstF5I
| GGATGNN| |
2089 |
BstUI
| CG|CG |
961, 1416, 1505, 2026 |
BstYI
| Pu|GATCPy |
303, 1906 |
BtgI
| C|CPuPyGG |
917, 1251 |
Cac8I
| GCN|NGC |
1205 |
Cfr10I
| [AG]|CCGG[TC] |
250 |
DdeI
| C|TNAG |
166, 1333, 1536, 1902, 2021 |
DpnI
| GA-CH3|TC |
141, 302, 632, 888, 1124, 1748, 1905 |
DpnII
| |GATC |
141, 302, 632, 888, 1124, 1748, 1905 |
DrdI
| GACNNNN|NNGTC |
621 |
EaeI
| Py|GGCCPu |
315, 959, 1085, 1498 |
EagI
| C|GGCCG |
959, 1085 |
EcoRI
| G|AATTC |
2004 |
EcoRV
| GAT|ATC |
609 |
Fnu4HI
| GC|NGC |
286, 405, 747, 900, 921, 960, 1069, 1257, 1329, 1374, 1496, 1878, 1971, 1983 |
HaeIII
| GG|CC |
314, 958, 1084, 1247, 1497, 1892 |
HhaI
| GCG|C |
962 |
HinP1I
| G|CGC |
962 |
HincII
| GTPy|PuAC |
1398, 2051, 2095 |
HindIII
| A|AGCTT |
1490 |
HinfI
| G|ANTC |
133, 147, 207, 230, 243, 387, 431, 836, 1381, 1701 |
HpaI
| GTT|AAC |
1398, 2095 |
HpaII
| C|CGG |
219, 233, 249, 279, 325, 368, 896, 1086, 1392 |
Hpy188I
| TCN|GA |
144, 261, 359, 551, 886, 1122, 1127, 1448, 1823, 1866, 1992, 2022 |
Hpy99I
| CG[AT]CG| |
613, 1081, 1185, 1772, 1931 |
HpyCH4III
| ACN|GT |
455, 675, 1187, 1252, 1265, 1453, 1897, 2014 |
HpyCH4IV
| A|CGT |
614, 681, 2045, 2097, 2130 |
HpyCH4V
| TG|CA |
414, 576, 748, 1212, 1321, 1372, 1582 |
MboI
| |GATC |
141, 302, 632, 888, 1124, 1748, 1905 |
MluI
| A|CGCGT |
2027 |
MseI
| T|TAA |
158, 270, 875, 935, 1314, 1338, 1397, 1914, 2094 |
MslI
| CAPyNN|NNPuTG |
1243 |
MspA1I
| C[AC]G|C[GT]G |
288, 693, 923, 1376, 1985 |
MspI
| C|CGG |
219, 233, 249, 279, 325, 368, 896, 1086, 1392 |
MwoI
| GCNNNNN|NNGC |
350, 378, 405, 602, 756, 1287, 1329, 1442, 1860, 1878, 1980, 2034 |
NciI
| CC|[CG]GG |
279, 1393 |
NcoI
| C|CATGG |
917 |
NdeI
| CA|TATG |
568 |
NlaIII
| CATG| |
412, 511, 916, 1165, 2083, 2167 |
NlaIV
| GGN|NCC |
485, 673, 787 |
NsiI
| ATGCA|T |
577 |
NspI
| PuCATG|Py |
512, 2168 |
PaeR7I
| C|TCGAG |
945 |
PciI
| A|CATGT |
512 |
PmlI
| CAC|GTG |
682, 2046 |
PsiI
| TTA|TAA |
2102 |
PstI
| CTGCA|G |
749 |
RsaI
| GT|AC |
949, 1189, 1267, 1690 |
Sau3AI
| |GATC |
141, 302, 632, 888, 1124, 1748, 1905 |
Sau96I
| G|GNCC |
673, 1181, 1247, 1825 |
ScrFI
| CC|NGG |
279, 1393 |
SfcI
| C|TPuPyAG |
749 |
SmlI
| C|TPyPuAG |
346, 936, 945, 1339 |
SspI
| AAT|ATT |
364 |
StyI
| C|C[AT][AT]GG |
105, 481, 917 |
Taqƒ¿I
| T|CGA |
135, 306, 611, 944, 1233, 1551, 1603, 2070 |
TfiI
| G|A[AT]TC |
133, 147, 207, 230, 243, 387, 431, 1381, 1701 |
TliI
| C|TCGAG |
945 |
TseI
| G|C[AT]GC |
286, 405, 747, 900, 921, 1069, 1374, 1878 |
Tsp45I
| |GT[CG]AC |
2128 |
Tsp509I
| |AATT |
31, 56, 155, 272, 494, 791, 828, 848, 882, 1637, 1728, 2003 |
TspRI
| NNCA[CG]TGNN| |
1816 |
XcmI
| CCANNNNN|NNNNTGG |
669 |
XhoI
| C|TCGAG |
945 |
XmnI
| GAANN|NNTTC |
1231, 1386 |
Click here to view TAIR data
>AT4G36870.2 length:2220
ATGGGAATAA CTAAAACTTC TCCTAATACT ACAATTCTCT TGAAGACTTT | 50 |
TCACAATAAT TCTATGTCCC AAGATTATCA TCATCATCAT CATCATAATC | 100 |
AACACCAAGG AGGTATCTTC AACTTCTCTA ATGGATTCGA CCGATCAGAT | 150 |
TCTCCCAATT TAACAACTCA GCAGAAGCAA GAGCATCAAA GGGTAGAGAT | 200 |
GGACGAGGAA TCTTCAGTCG CCGGAGGTAG GATTCCGGTC TACGAATCAG | 250 |
CCGGTATGTT ATCCGAAATG TTTAATTTCC CCGGAAGCAG CGGTGGAGGA | 300 |
AGAGATCTCG ACCTCGGCCA ATCTTTCCGG TCAAATAGGC AGTTGCTTGA | 350 |
GGAGCAACAT CAGAATATTC CGGCTATGAA TGCTACGGAT TCAGCCACCG | 400 |
CCACCGCAGC CGCCATGCAG TTATTCTTGA TGAATCCACC GCCACCGCAA | 450 |
CAACCACCGT CTCCGTCATC CACAACTTCC CCAAGGAGCC ACCACAATTC | 500 |
TTCAACTCTT CACATGTTAC TTCCAAGTCC ATCCACCAAC ACAACTCACC | 550 |
ATCAGAACTA CACTAATCAT ATGTCTATGC ATCAGCTTCC ACATCAGCAT | 600 |
CACCAGCAGA TATCGACGTG GCAGTCTTCT CCCGATCATC ATCATCATCA | 650 |
TCACAACAGC CAAACGGAGA TTGGGACCGT CCACGTGGAA AACAGCGGAG | 700 |
GACACGGAGG ACAAGGCTTG TCCTTATCTC TCTCATCGTC TTTAGAGGCT | 750 |
GCAGCAAAAG CGGAAGAGTA TAGAAACATT TACTACGGAG CCAATTCTTC | 800 |
TAACGCATCA CCTCATCATC AATACAATCA ATTCAAGACT CTTCTTGCTA | 850 |
ATTCTTCTCA ACATCACCAT CAAGTATTAA ACCAATTCCG ATCATCTCCG | 900 |
GCTGCTTCTT CCTCTTCCAT GGCAGCGGTC AATATCTTAA GAAACTCGAG | 950 |
GTACACAACG GCCGCGCAAG AGTTGTTGGA AGAGTTTTGT AGTGTTGGAA | 1000 |
GAGGATTTTT GAAGAAGAAC AAACTTGGGA ACAGCTCAAA CCCTAATACT | 1050 |
TGCGGTGGTG ATGGTGGTGG CAGCTCTCCT TCGTCGGCCG GAGCAAACAA | 1100 |
GGAGCATCCT CCTTTATCGG CGTCTGATCG GATTGAGCAT CAAAGAAGGA | 1150 |
AAGTGAAACT ACTCACCATG CTTGAAGAGG TGGACCGACG GTACAACCAT | 1200 |
TACTGCGAGC AAATGCAGAT GGTTGTGAAC TCTTTCGACA TAGTAATGGG | 1250 |
CCACGGTGCG GCATTACCGT ACACCGCATT GGCTCAAAAA GCTATGTCAA | 1300 |
GACATTTTAG ATGCCTTAAA GATGCAGTTG CGGCTCAGCT TAAGCAGAGT | 1350 |
TGCGAACTTC TTGGGGACAA AGATGCAGCG GGAATCTCTT CTTCCGGGTT | 1400 |
AACAAAAGGT GAAACTCCGC GTTTGCGTTT GCTAGAGCAA AGTTTGCGTC | 1450 |
AGAACCGTGC GTTTCATCAA ATGGGTATGA TGGAACAAGA AGCTTGGCGG | 1500 |
CCACAACGCG GTTTGCCTGA ACGCTCCGTC AATATACTTA GAGCTTGGCT | 1550 |
CTTCGAACAT TTCCTTCACC CGTATCCAAG TGATGCAGAT AAACACCTAT | 1600 |
TGGCTCGACA GACTGGTTTA TCCAGAAATC AGGTATCAAA TTGGTTCATA | 1650 |
AATGCTAGGG TTCGTTTATG GAAACCAATG GTGGAAGAAA TGTACCAACA | 1700 |
AGAATCAAAA GAAAGAGAAA GAGAAGAGGA ATTAGAAGAG AACGAAGAAG | 1750 |
ATCAAGAAAC AAAAAACAGC AACGACGACA AGAGCACAAA ATCCAACAAC | 1800 |
AATGAAAGCA ACTTCACTGC CGTTCGGACC ACTTCACAAA CTCCAACGAC | 1850 |
AACCGCACCA GACGCATCAG ACGCAGACGC AGCAGTAGCG ACAGGCCACC | 1900 |
GTCTAAGATC CAACATTAAT GCTTACGAAA ACGACGCTTC ATCACTTCTA | 1950 |
CTCCCTTCCT CTTATTCCAA CGCCGCCGCT CCTGCCGCTG TTTCTGACGA | 2000 |
CTTGAATTCT CGTTACGGTG GCTCAGACGC GTTTTCCGCC GTTGCCACGT | 2050 |
GTCAACAAAG TGTAGGTGGG TTCGATGATG CTGACATGGA TGGTGTTAAC | 2100 |
GTTATAAGGT TTGGGACAAA CCCTACTGGT GACGTGTCTC TCACGCTTGG | 2150 |
TTTACGCCAC GCTGGAAACA TGCCTGACAA AGACGCTTCT TTCTGCGTTA | 2200 |
GAGAGTTTGG GGGTTTTTAG | 2250 |
>AT4G36870.2 longest ORF length:739
MGITKTSPNT TILLKTFHNN SMSQDYHHHH HHNQHQGGIF NFSNGFDRSD | 50 |
SPNLTTQQKQ EHQRVEMDEE SSVAGGRIPV YESAGMLSEM FNFPGSSGGG | 100 |
RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ | 150 |
QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH | 200 |
HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA | 250 |
AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP | 300 |
AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT | 350 |
CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH | 400 |
YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS | 450 |
CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR | 500 |
PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI | 550 |
NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN | 600 |
NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL | 650 |
LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN | 700 |
VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF | 750 |
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