fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G36930 SPT, bHLH024 SPATULA, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT4G36930.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 3
HindIII A|AGCTT 653
HpaI GTT|AAC 1020
StyI C|C[AT][AT]GG 1030
XhoI C|TCGAG 273, 443


Click here to view TAIR data

>AT4G36930.1 length:1122
ATGATATCAC AGAGAGAAGA AAGAGAAGAG AAGAAGCAGA GAGTGATGGG 
50
AGATAAGAAA TTGATTTCAT CTTCTTCTTC TTCCTCGGTT TACGATACTC 
100
GTATCAATCA TCATCTTCAT CATCCTCCGT CTTCTTCCGA CGAAATCTCT 
150
CAGTTTCTCC GGCATATTTT CGACCGTTCT TCTCCTTTAC CTTCTTACTA 
200
CTCCCCGGCG ACGACTACAA CGACGGCGTC TTTGATTGGT GTGCACGGGA 
250
GCGGTGACCC ACATGCAGAT AACTCGAGAA GTCTCGTTTC TCATCATCCA 
300
CCGTCAGATT CTGTGCTTAT GTCGAAACGT GTCGGAGATT TCTCTGAGGT 
350
TTTAATCGGC GGAGGATCAG GCTCAGCCGC CGCGTGTTTT GGTTTCTCCG 
400
GTGGTGGTAA TAATAACAAC GTTCAAGGAA ATAGCTCTGG GACTCGAGTA 
450
TCGTCTTCTT CCGTTGGAGC TAGTGGCAAC GAGACAGATG AGTATGACTG 
500
TGAAAGCGAG GAAGGAGGAG AAGCTGTAGT TGATGAAGCT CCCTCTTCCA 
550
AGTCAGGTCC TTCTTCTCGT AGTTCATCTA AAAGATGCAG AGCTGCTGAA 
600
GTTCATAATC TCTCTGAGAA GAGGAGGAGA AGTAGAATTA ATGAAAAAAT 
650
GAAAGCTTTA CAAAGTCTCA TCCCTAATTC AAATAAGACG GATAAGGCTT 
700
CAATGCTTGA TGAAGCCATT GAGTATCTGA AACAGCTTCA GCTCCAAGTT 
750
CAGATGTTGA CTATGAGAAA TGGAATAAAC TTGCATCCTT TGTGTTTACC 
800
TGGAACTACA TTACACCCAT TGCAACTCTC TCAGATTCGA CCCCCTGAAG 
850
CAACCAATGA TCCTCTGCTT AATCATACCA ATCAGTTTGC TTCGACTTCT 
900
AATGCACCGG AAATGATCAA TACTGTGGCT TCTTCATACG CTTTGGAACC 
950
TTCTATTCGC AGTCACTTTG GACCTTTCCC TCTCCTTACT TCACCCGTGG 
1000
AGATGAGTCG GGAAGGTGGG TTAACTCATC CAAGGTTGAA CATTGGTCAT 
1050
TCCAACGCAA ACATAACCGG GGAACAAGCT CTGTTTGATG GACAACCTGA 
1100
CCTAAAAGAT CGAATTACTT GA
1150

>AT4G36930.1 longest ORF length:373
MISQREEREE KKQRVMGDKK LISSSSSSSV YDTRINHHLH HPPSSSDEIS 
50
QFLRHIFDRS SPLPSYYSPA TTTTTASLIG VHGSGDPHAD NSRSLVSHHP 
100
PSDSVLMSKR VGDFSEVLIG GGSGSAAACF GFSGGGNNNN VQGNSSGTRV 
150
SSSSVGASGN ETDEYDCESE EGGEAVVDEA PSSKSGPSSR SSSKRCRAAE 
200
VHNLSEKRRR SRINEKMKAL QSLIPNSNKT DKASMLDEAI EYLKQLQLQV 
250
QMLTMRNGIN LHPLCLPGTT LHPLQLSQIR PPEATNDPLL NHTNQFASTS 
300
NAPEMINTVA SSYALEPSIR SHFGPFPLLT SPVEMSREGG LTHPRLNIGH 
350
SNANITGEQA LFDGQPDLKD RIT
400