fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G36990 AT-HSFB1, ATHSF4, HSF4, HsfB1 ARABIDOPSIS THALIANA HEAT SHOCK FACTOR 4, ARABIDOPSIS THALIANA CLASS B HEAT SHOCK FACTOR B1, heat shock factor 4 (.1)

>AT4G36990.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 153
HindIII A|AGCTT 192, 484
SacI GAGCT|C 510, 517


Click here to view TAIR data

>AT4G36990.1 length:855
ATGACGGCTG TGACGGCGGC GCAAAGATCA GTTCCGGCGC CGTTTTTAAG 
50
CAAAACGTAT CAGCTAGTTG ATGATCATAG CACAGACGAC GTCGTTTCAT 
100
GGAACGAAGA AGGAACAGCT TTTGTCGTGT GGAAAACAGC AGAGTTTGCT 
150
AAAGATCTTC TTCCTCAATA CTTCAAGCAT AATAATTTCT CAAGCTTCAT 
200
TCGTCAGCTC AACACTTACG GATTTCGTAA AACTGTACCG GATAAATGGG 
250
AATTTGCAAA CGATTATTTC CGGAGAGGCG GGGAGGATCT GTTGACGGAC 
300
ATACGACGGC GTAAATCGGT GATTGCTTCA ACGGCGGGGA AATGTGTTGT 
350
TGTTGGTTCG CCTTCTGAGT CTAATTCTGG TGGTGGTGAT GATCACGGTT 
400
CAAGCTCCAC GTCATCACCC GGTTCGTCGA AGAATCCTGG TTCGGTGGAG 
450
AACATGGTTG CTGATTTATC AGGAGAGAAC GAGAAGCTTA AACGTGAAAA 
500
CAATAACTTG AGCTCGGAGC TCGCGGCGGC GAAGAAGCAG CGCGATGAGC 
550
TAGTGACGTT CTTGACGGGT CATCTGAAAG TAAGACCGGA ACAAATCGAT 
600
AAAATGATCA AAGGAGGGAA ATTTAAACCG GTGGAGTCTG ACGAAGAGAG 
650
TGAGTGCGAA GGTTGCGACG GCGGCGGAGG AGCAGAGGAG GGGGTAGGTG 
700
AAGGATTGAA ATTGTTTGGG GTGTGGTTGA AAGGAGAGAG AAAAAAGAGG 
750
GACCGGGATG AAAAGAATTA TGTGGTGAGT GGGTCCCGTA TGACGGAAAT 
800
AAAGAACGTG GACTTTCACG CGCCGTTGTG GAAAAGCAGC AAAGTCTGCA 
850
ACTAA
900

>AT4G36990.1 longest ORF length:284
MTAVTAAQRS VPAPFLSKTY QLVDDHSTDD VVSWNEEGTA FVVWKTAEFA 
50
KDLLPQYFKH NNFSSFIRQL NTYGFRKTVP DKWEFANDYF RRGGEDLLTD 
100
IRRRKSVIAS TAGKCVVVGS PSESNSGGGD DHGSSSTSSP GSSKNPGSVE 
150
NMVADLSGEN EKLKRENNNL SSELAAAKKQ RDELVTFLTG HLKVRPEQID 
200
KMIKGGKFKP VESDEESECE GCDGGGGAEE GVGEGLKLFG VWLKGERKKR 
250
DRDEKNYVVS GSRMTEIKNV DFHAPLWKSS KVCN
300