Locus |
Common name |
Short description |
AT4G36990 |
AT-HSFB1, ATHSF4, HSF4, HsfB1 |
ARABIDOPSIS THALIANA HEAT SHOCK FACTOR 4, ARABIDOPSIS THALIANA CLASS B HEAT SHOCK FACTOR B1, heat shock factor 4 (.1) |
>AT4G36990.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
153 |
HindIII
| A|AGCTT |
192, 484 |
SacI
| GAGCT|C |
510, 517 |
Click here to view TAIR data
>AT4G36990.1 length:855
ATGACGGCTG TGACGGCGGC GCAAAGATCA GTTCCGGCGC CGTTTTTAAG | 50 |
CAAAACGTAT CAGCTAGTTG ATGATCATAG CACAGACGAC GTCGTTTCAT | 100 |
GGAACGAAGA AGGAACAGCT TTTGTCGTGT GGAAAACAGC AGAGTTTGCT | 150 |
AAAGATCTTC TTCCTCAATA CTTCAAGCAT AATAATTTCT CAAGCTTCAT | 200 |
TCGTCAGCTC AACACTTACG GATTTCGTAA AACTGTACCG GATAAATGGG | 250 |
AATTTGCAAA CGATTATTTC CGGAGAGGCG GGGAGGATCT GTTGACGGAC | 300 |
ATACGACGGC GTAAATCGGT GATTGCTTCA ACGGCGGGGA AATGTGTTGT | 350 |
TGTTGGTTCG CCTTCTGAGT CTAATTCTGG TGGTGGTGAT GATCACGGTT | 400 |
CAAGCTCCAC GTCATCACCC GGTTCGTCGA AGAATCCTGG TTCGGTGGAG | 450 |
AACATGGTTG CTGATTTATC AGGAGAGAAC GAGAAGCTTA AACGTGAAAA | 500 |
CAATAACTTG AGCTCGGAGC TCGCGGCGGC GAAGAAGCAG CGCGATGAGC | 550 |
TAGTGACGTT CTTGACGGGT CATCTGAAAG TAAGACCGGA ACAAATCGAT | 600 |
AAAATGATCA AAGGAGGGAA ATTTAAACCG GTGGAGTCTG ACGAAGAGAG | 650 |
TGAGTGCGAA GGTTGCGACG GCGGCGGAGG AGCAGAGGAG GGGGTAGGTG | 700 |
AAGGATTGAA ATTGTTTGGG GTGTGGTTGA AAGGAGAGAG AAAAAAGAGG | 750 |
GACCGGGATG AAAAGAATTA TGTGGTGAGT GGGTCCCGTA TGACGGAAAT | 800 |
AAAGAACGTG GACTTTCACG CGCCGTTGTG GAAAAGCAGC AAAGTCTGCA | 850 |
ACTAA | 900 |
>AT4G36990.1 longest ORF length:284
MTAVTAAQRS VPAPFLSKTY QLVDDHSTDD VVSWNEEGTA FVVWKTAEFA | 50 |
KDLLPQYFKH NNFSSFIRQL NTYGFRKTVP DKWEFANDYF RRGGEDLLTD | 100 |
IRRRKSVIAS TAGKCVVVGS PSESNSGGGD DHGSSSTSSP GSSKNPGSVE | 150 |
NMVADLSGEN EKLKRENNNL SSELAAAKKQ RDELVTFLTG HLKVRPEQID | 200 |
KMIKGGKFKP VESDEESECE GCDGGGGAEE GVGEGLKLFG VWLKGERKKR | 250 |
DRDEKNYVVS GSRMTEIKNV DFHAPLWKSS KVCN | 300 |
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