fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G37180 Homeodomain-like superfamily protein (.1.2)

>AT4G37180.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 339


Click here to view TAIR data

>AT4G37180.1 length:1071
ATGGTTCAAA CAGAAACCGA TCAAAGGATG GGTCTTAATC TGAATTTGTC 
50
TATCTACTCT TTACCAAAAC CCTTATCTCA ATTTCTCGAT GAAGTGTCGA 
100
GGATCAAAGA CAATCATTCC AAACTGTCTG AAATCGATGG TTATGTCGGA 
150
AAATTAGAGG AAGAAAGGAA CAAAATCGAT GTTTTTAAAC GAGAACTCCC 
200
TTTATGCATG CTCTTATTGA ACGAAGCGAT TGGGGCGTTG AAGGATGAGG 
250
CTAGAAAAGG GTTATCACTG ATGGCATCTA ATGGGAAATT CGATGATGTT 
300
GAAAGGGCAA AACCGGAAAC TGATAAGAAG AGCTGGATGA GCTCTGCCCA 
350
GTTATGGATC TCGAACCCTA ATTCCCAATT CCGATCGACA AATGAAGAAG 
400
AAGAAGATCG GTGTGTGAGT CAGAACCCAT TTCAGACATG TAATTACCCT 
450
AATCAAGGAG GGGTATTTAT GCCATTTAAC CGTCCCCCAC CTCCTCCACC 
500
ACCAGCTCCT CTGTCTCTCA TGACTCCAAC ATCAGAGATG ATGATGGATT 
550
ATAGCAGAAT TGAGCAGAGT CATCATCATC ATCAATTCAA TAAACCTTCT 
600
TCACAGAGTC ATCACATTCA GAAGAAAGAG CAGAGAAGGA GATGGTCACA 
650
GGAACTTCAC CGTAAATTTG TTGATGCTCT TCATAGGCTT GGAGGGCCAC 
700
AAGTTGCTAC ACCAAAGCAG ATTAGAGATT TGATGAAAGT TGATGGTTTA 
750
ACCAATGATG AAGTCAAGAG CCATTTACAA AAATATAGAA TGCATATCCG 
800
TAAGCATCCG CTGCATCCGA CAAAGACTTT GTCATCGTCG GATCAGCCAG 
850
GTGTGTTAGA GAGAGAATCG CAGAGCTTAA TAAGTTTGTC GAGGTCGGAT 
900
TCGCCACAAA GCCCACTTGT TGCAAGAGGG TTGTTCAGTA GTAATGTTGG 
950
TCATAGCTCA GAGGAAGATG AGGAGGAGGA GGATGAAGAG GAGGAGAAGT 
1000
CTGATGGACG TAGTAGCTGT AGAAATGATG AAACAAAGAA GAAGAGACAA 
1050
GTGTTGGATC TTGAGCTTTG A
1100

>AT4G37180.1 longest ORF length:356
MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG 
50
KLEEERNKID VFKRELPLCM LLLNEAIGAL KDEARKGLSL MASNGKFDDV 
100
ERAKPETDKK SWMSSAQLWI SNPNSQFRST NEEEEDRCVS QNPFQTCNYP 
150
NQGGVFMPFN RPPPPPPPAP LSLMTPTSEM MMDYSRIEQS HHHHQFNKPS 
200
SQSHHIQKKE QRRRWSQELH RKFVDALHRL GGPQVATPKQ IRDLMKVDGL 
250
TNDEVKSHLQ KYRMHIRKHP LHPTKTLSSS DQPGVLERES QSLISLSRSD 
300
SPQSPLVARG LFSSNVGHSS EEDEEEEDEE EEKSDGRSSC RNDETKKKRQ 
350
VLDLEL
400