fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G37180 Homeodomain-like superfamily protein (.1.2)

>AT4G37180.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 360


Click here to view TAIR data

>AT4G37180.2 length:1092
ATGGTTCAAA CAGAAACCGA TCAAAGGATG GGTCTTAATC TGAATTTGTC 
50
TATCTACTCT TTACCAAAAC CCTTATCTCA ATTTCTCGAT GAAGTGTCGA 
100
GGATCAAAGA CAATCATTCC AAACTGTCTG AAATCGATGG TTATGTCGGA 
150
AAATTAGAGG AAGAAAGGAA CAAAATCGAT GTTTTTAAAC GAGAACTCCC 
200
TTTATGCATG CTCTTATTGA ACGAAGAGAT TGTTTTTCTC TGTGTAGCGA 
250
TTGGGGCGTT GAAGGATGAG GCTAGAAAAG GGTTATCACT GATGGCATCT 
300
AATGGGAAAT TCGATGATGT TGAAAGGGCA AAACCGGAAA CTGATAAGAA 
350
GAGCTGGATG AGCTCTGCCC AGTTATGGAT CTCGAACCCT AATTCCCAAT 
400
TCCGATCGAC AAATGAAGAA GAAGAAGATC GGTGTGTGAG TCAGAACCCA 
450
TTTCAGACAT GTAATTACCC TAATCAAGGA GGGGTATTTA TGCCATTTAA 
500
CCGTCCCCCA CCTCCTCCAC CACCAGCTCC TCTGTCTCTC ATGACTCCAA 
550
CATCAGAGAT GATGATGGAT TATAGCAGAA TTGAGCAGAG TCATCATCAT 
600
CATCAATTCA ATAAACCTTC TTCACAGAGT CATCACATTC AGAAGAAAGA 
650
GCAGAGAAGG AGATGGTCAC AGGAACTTCA CCGTAAATTT GTTGATGCTC 
700
TTCATAGGCT TGGAGGGCCA CAAGTTGCTA CACCAAAGCA GATTAGAGAT 
750
TTGATGAAAG TTGATGGTTT AACCAATGAT GAAGTCAAGA GCCATTTACA 
800
AAAATATAGA ATGCATATCC GTAAGCATCC GCTGCATCCG ACAAAGACTT 
850
TGTCATCGTC GGATCAGCCA GGTGTGTTAG AGAGAGAATC GCAGAGCTTA 
900
ATAAGTTTGT CGAGGTCGGA TTCGCCACAA AGCCCACTTG TTGCAAGAGG 
950
GTTGTTCAGT AGTAATGTTG GTCATAGCTC AGAGGAAGAT GAGGAGGAGG 
1000
AGGATGAAGA GGAGGAGAAG TCTGATGGAC GTAGTAGCTG TAGAAATGAT 
1050
GAAACAAAGA AGAAGAGACA AGTGTTGGAT CTTGAGCTTT GA
1100

>AT4G37180.2 longest ORF length:363
MVQTETDQRM GLNLNLSIYS LPKPLSQFLD EVSRIKDNHS KLSEIDGYVG 
50
KLEEERNKID VFKRELPLCM LLLNEEIVFL CVAIGALKDE ARKGLSLMAS 
100
NGKFDDVERA KPETDKKSWM SSAQLWISNP NSQFRSTNEE EEDRCVSQNP 
150
FQTCNYPNQG GVFMPFNRPP PPPPPAPLSL MTPTSEMMMD YSRIEQSHHH 
200
HQFNKPSSQS HHIQKKEQRR RWSQELHRKF VDALHRLGGP QVATPKQIRD 
250
LMKVDGLTND EVKSHLQKYR MHIRKHPLHP TKTLSSSDQP GVLERESQSL 
300
ISLSRSDSPQ SPLVARGLFS SNVGHSSEED EEEEDEEEEK SDGRSSCRND 
350
ETKKKRQVLD LEL
400